Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01217 ATGAAAAAATCGCTCTCCAAAGGCTCGGAGTCGTCCACTCAGTTGGACTCGCCGCTCCAATTCCACTCGCCGATGCGGTGGGACGGGACCGATCCGCCGGAGTCTCCGGAATACCGATCTCCGGGAAACTTGACGGAAAGGCATGTGGACCACTCTATGGCAATCGTCACCGTCGGCAACCTCAAGCAGCTCGCTCCAGACAAGCGCGCGGAGCACCGGAAGCCGCCGGAAAATCCGCCGCCTCCTTTGAGGGTGTTCAACGGCACGGTGACGGAGGAGACGCAGCGTCCGGTGGCGAAAACGGCTCCTGCGATGGTCGGAGGCGAGAGGAGATCGAGGTCGTCGGGGTGGACTACGGAGGAGACGGTGTGCAAGGCGGCTCTAGGGTTCCGGCTGAGCGAGATGGTGGTGTGTCTGATTTCGTTTTCTGTTATGGCGGCGGATAAGACGCAAGGATGGAGCGGTGACTCCTTTGATCGCTATAGAGAATATAGGTACTGTTTATCTGTTAATATAATTGGATTTGCATACTCAGCGTTGCAAGCATGTGATCTGTCATGTCAACTTGCCACTGGGAAACACTTTATCAGTCACCACCTTCGCAACCACTTTGATTTCTTCATGGATCAGGCATGTCCTACCACTCTGTTTCTGTTCCTCTGTTATGTTGTGGTTCTGGCTTATCTTCTGATATCAGCATCATCATCTGCAGCCACACGGGTTGATGATTGGATATCGAATTGGGGGAAAGATGAGTTCACAGAAATGGCCACTGCTTCAATTGGAATGTCCTTCGTCTCTTTTCTTGCCTTTGCTATGAGTTCACTCATCTCTGGTTACACCCTATGCAACCGCAGCTCCATGTGA 867 0.5283 MKKSLSKGSESSTQLDSPLQFHSPMRWDGTDPPESPEYRSPGNLTERHVDHSMAIVTVGNLKQLAPDKRAEHRKPPENPPPPLRVFNGTVTEETQRPVAKTAPAMVGGERRSRSSGWTTEETVCKAALGFRLSEMVVCLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNIIGFAYSALQACDLSCQLATGKHFISHHLRNHFDFFMDQACPTTLFLFLCYVVVLAYLLISASSSAATRVDDWISNWGKDEFTEMATASIGMSFVSFLAFAMSSLISGYTLCNRSSM 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01217 288 MobiDBLite consensus disorder prediction 1 45 - -
Vimu10g01217 288 Pfam Casparian strip membrane protein domain 123 270 IPR006702 -
Vimu10g01217 288 PANTHER CASP-LIKE PROTEIN 4A4 101 283 - -
Vimu10g01217 288 MobiDBLite consensus disorder prediction 92 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01217 Vimu-Chr10 12063082 12064518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01217 - - gmx:100789870 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00678 7 6763547 6765029 Vimu10g01217 10 12063082 12064518 ECH
Vimu10g01217 10 12063082 12064518 Vimu10g01217 10 12063082 12064518 ECH
Vimu7g00678 7 6763547 6765029 Vimu10g01217 10 12063082 12064518 PCT