Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00674 ATGGCCACCCAATCCCCGCCGCCGCCTTCCACTTCCACCGCCACGGACGAAAACAAAGGTTCTGAGACTGCGCAACTAGCCAATATGGATCAGCAAAACACCAGAGAAGCAGAGCCTCCCAAACCTAGTTCAACTCCATCAGTATTTGTAAACTCACAACCGATGAGGGAAGAACAAGTTCAGAATGCTGTGAAATTTCTGTCTCACCCAAAAGTTAGAGGTTCACCTGTCATGTATAGGCGATCATTTTTAGAGAAGAAGGGCCTTACAAAGGAGGAGATTGATGAAGCCTTTCGGCGAGTGCCAGATTCAGCTCCAACTGTGCAGACAGGCGGTGTAAATCAAGGTGAAGTGTCTAATATTGAAGTTTTCCTTTGTAACTGTGGATCGAGTCAAATTGCATGTGAAATCTGTTTAACTTCATTTTTGATAAGCTTGATAGGTATTGCTTGGCCGGTTTCACCTGCTTCTACAGTTGTTAAAACTTCATCAGGAACATTACCACGCTCAAGATTTCACTGGTCCCATGCCCTTATTGCAGTTGGATTACTGGCCGCTTCAGGTGCTGGAACAGCTATAATAATTAAGAAATCTTTTCTCCCTCGGTTAAAATCTTGGATACGTAAGGTTGTCCTTGACAATGATGATGAACAATTGAAGAAAACTGATAACAAACCAACATTGATGGAAGAAGCTGCACAAGCTGCAAAATCAGCTGCAGCTGCAGCTGAAGAAGTGGCAAAAGCGAGCCAAGAAATTCTGGCTTCAAAAGGTGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTTTTAGACAAGCAAGTACAAGAAATGAAGTCAATGACAAATGCCATAAGAAGATTGGAAGTGAGATCTTCATCTCCACCTGCATCTGTTCAACCATCAAGTGGTCTTCATCCAAAGTCATATATGGAGGTGCAAAACACGTCTACTCAGATTCTTCAATCTCAAGTAAATGGTGAAGACCTGAATACCAAGACCCAGGATACGTCTATAGTAAATGGGGATGACCCATTGCCCTGGTGGCAGAGGAAAAATGTCAGAATCACAGAGATTGAGAATGAAAATGAGTCTAATGGAGTACCTTATGCTGCTAGTCAGCTGCCAGTTCAACGTGTATGGGTTCCTCCTCAACCTCCACCCATAGCCATGCCTGGGGCTGCAGAAGCTATCAGACGCCCAAAGCAGGTGGCCCAAAAGGAACAGAAGTCGGATAATCAGTCATTGGCTCAATCTTCTGACAGCTCTGACGACGTTCAAGGGGTCTCAAAACCATTGGAATCTGGAGGTGCAGTAGAGGGCAGCAGTGTCAGCTCAGTTCCCAGCTCCAGTGAGATACAAGAGGAGCATGAAGTCCAATATGATGAGAAATGA 1395 0.4473 MATQSPPPPSTSTATDENKGSETAQLANMDQQNTREAEPPKPSSTPSVFVNSQPMREEQVQNAVKFLSHPKVRGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTGGVNQGEVSNIEVFLCNCGSSQIACEICLTSFLISLIGIAWPVSPASTVVKTSSGTLPRSRFHWSHALIAVGLLAASGAGTAIIIKKSFLPRLKSWIRKVVLDNDDEQLKKTDNKPTLMEEAAQAAKSAAAAAEEVAKASQEILASKGEERRYFVEVVSLLDKQVQEMKSMTNAIRRLEVRSSSPPASVQPSSGLHPKSYMEVQNTSTQILQSQVNGEDLNTKTQDTSIVNGDDPLPWWQRKNVRITEIENENESNGVPYAASQLPVQRVWVPPQPPPIAMPGAAEAIRRPKQVAQKEQKSDNQSLAQSSDSSDDVQGVSKPLESGGAVEGSSVSSVPSSSEIQEEHEVQYDEK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00674 464 MobiDBLite consensus disorder prediction 398 464 - -
Vimu7g00674 464 MobiDBLite consensus disorder prediction 439 454 - -
Vimu7g00674 464 MobiDBLite consensus disorder prediction 1 49 - -
Vimu7g00674 464 Gene3D - 48 110 IPR036388 -
Vimu7g00674 464 Coils Coil 232 252 - -
Vimu7g00674 464 Coils Coil 271 291 - -
Vimu7g00674 464 Pfam Pex14 N-terminal domain 56 100 IPR006785 -
Vimu7g00674 464 MobiDBLite consensus disorder prediction 408 429 - -
Vimu7g00674 464 FunFam Peroxisomal membrane protein PEX14 48 110 - -
Vimu7g00674 464 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 458 IPR025655 GO:0005515|GO:0005778|GO:0016560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00674 Vimu-Chr7 6717674 6725725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00674 K13343 - gmx:100784152 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00674 7 6717674 6725725 Vimu7g00674 7 6717674 6725725 ECH
Vimu7g00674 7 6717674 6725725 Vimu10g01225 10 12174797 12182546 PCT