Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01225 TTGCCTTTTCTCTATCACTGTAGGAATAATCAACACTGCGAATGCGATGAGCAAAAACACACCTCGATTGGGAGTTCAGAGATAGCGCGACCAGGGGCTATGGCTTCTCAATCCTCGTCTCTTCCCATTTCCACAGTTCAAACCGCTGGTGGTGAAATTGCACAACCGGAAAATGTTGATCGGCAGAATAGTGGAGAGGAGCTTGGCAAACAAAGTTCAGACACATCTGTGTTTGTTAACTCAGAACCAATGCGCGAGGAACAAATTCAGAATGCTGTGAAATTTCTATCGCACCCGAAAGTTAGAGGTTCTCCTGTTATCCATAGGCGGTCATTTCTGGAGAAGAAGGGCCTTACGAAGGAGGAGATTGATGAAGCCTTTAGGCGTGTGCCTGATTCAGCTCCCAGTGTGCAAACAGCTGGTGTAATTCAAGGTGCAGTGTCTGATGTTGAAGTTGCCGAATTTTATATTAACTTGTGGCTCACTGTAATACTCACAGATGAACAATTAAAATCATCTTCAAACATTCATCAGCAAAGCCAACCACAGGCTTTGCAGACGACTGTACCAGCTTCTACTGGTGTTATTGCTTCACTGGGAACCTTGTCACGCCGCCGTTTTCACTGGTCTCATGCCCTTATTGCAGTTGGATTACTAGCTACTTCTGGTGCTGGTACAGTTATACTAATTAAGAATTCTGTTCTTCCTTGGTTAAAATCGTGGTTGCGCAATGTTGTGCTAGAAGGGGAAAATGACCAATTAAAGAGAACAGGCTCAAAACCAACTCTGGCAGAAGAAGCTGCACAGGCAGCAAAAGCAGCTGCAGTTGCAGCCGCTGATTTGGCAAAAGCTAGCCAAGAATTATTGACTTCTAAAATTGAAGAGAAAAGATATTTTGTACAAGTTGTGAGCCTTTTGGATAGGCAAGTGGAGGAAATGAAGTTGATGATCAATGCAGTAAAAAGATTGGAAGCCTCTGGTGGACTCTCTGTCTCCAAGCAAGACGATCCCCAAGTCACTCAAACAAGTTCAAAGATACAGCAGCCTGTCCTTTATGGGAAGTCAGACTACGAGTCCCAATCAGGTTTCTCATGGGAGGCATTTTTTGCATCACGGTTAGTCAGTGTAGAACATAGATGGTGGAAAAGGTGGAGAGGAAAACCCTTGTTTGCAGAGGCAGTGGTGCAAGTGAAGAAAACCCTAGAAATTGATGATTCACCCCCCAACCCTTATCAGCAACCATCAAACCCTCGCTTAGCCCCTAAAGCGAAGCCTTGGGAGGTTAGTCAGGTGCAAAACACCTCAACCCAAGTCGTCCAATATCAAGCAAATGGCAAGGTCCAAGATAGTGGTGGTGACAACTCAGTACCCTGGTGGCAAACGAAGGACATCAGAATCAAAGAGATTGATAACGAAGTTGAATATAATGTAGCACCTGCTGCATCCAGTCAGCAGCCAGTCCAACGATTGTGGGTTCCTCCTCAACCTCCCCCTATAGCAATGCGGGAGGCTGCGGAAGCAATCAGGCGCCCAAAATCAGTCGTCCAAAAGGAAGCAATTCAGGATGATCAGTCAGCACCAAATTCTTCAGAGTTCTCTAATGGATCCAATTCCGAAGATGCAATAGAAGGCAACGGCATCGACTCACTTATCAGCTCTGGTGAGATCCAAAATCATGAACTCAATTACGAAGAAAAATAA 1701 0.4515 MPFLYHCRNNQHCECDEQKHTSIGSSEIARPGAMASQSSSLPISTVQTAGGEIAQPENVDRQNSGEELGKQSSDTSVFVNSEPMREEQIQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFRRVPDSAPSVQTAGVIQGAVSDVEVAEFYINLWLTVILTDEQLKSSSNIHQQSQPQALQTTVPASTGVIASLGTLSRRRFHWSHALIAVGLLATSGAGTVILIKNSVLPWLKSWLRNVVLEGENDQLKRTGSKPTLAEEAAQAAKAAAVAAADLAKASQELLTSKIEEKRYFVQVVSLLDRQVEEMKLMINAVKRLEASGGLSVSKQDDPQVTQTSSKIQQPVLYGKSDYESQSGFSWEAFFASRLVSVEHRWWKRWRGKPLFAEAVVQVKKTLEIDDSPPNPYQQPSNPRLAPKAKPWEVSQVQNTSTQVVQYQANGKVQDSGGDNSVPWWQTKDIRIKEIDNEVEYNVAPAASSQQPVQRLWVPPQPPPIAMREAAEAIRRPKSVVQKEAIQDDQSAPNSSEFSNGSNSEDAIEGNGIDSLISSGEIQNHELNYEEK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01225 566 Pfam Pex14 N-terminal domain 85 129 IPR006785 -
Vimu10g01225 566 Coils Coil 306 326 - -
Vimu10g01225 566 MobiDBLite consensus disorder prediction 518 543 - -
Vimu10g01225 566 MobiDBLite consensus disorder prediction 511 566 - -
Vimu10g01225 566 FunFam Peroxisomal membrane protein PEX14 77 139 - -
Vimu10g01225 566 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 34 541 IPR025655 GO:0005515|GO:0005778|GO:0016560
Vimu10g01225 566 MobiDBLite consensus disorder prediction 51 75 - -
Vimu10g01225 566 Gene3D - 77 140 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01225 Vimu-Chr10 12174797 12182546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01225 K13343 - gmx:100807229 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00674 7 6717674 6725725 Vimu10g01225 10 12174797 12182546 PCT