Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00668 ATGGACAGACCCATTCACCATTCATCGGACACGCCTACTTATGTTTCGGATGATGAATCAGTGGTTTCTGATTGCGAGAGCGGGGTTTCAGGCGACGAGGGGACGTTTTCCGGAGCCTTTCTGCCGGCGCCCCAAGACGGCCTTCGTGTCCGGACTAGATTCGTCCGGAGCTTGCTCCTTAACGGGTTGATGCCCGAGGTGTTGTCGATTGCCAAGAACGCGCATTCCTCCGTCATGGCGCGTGCCCGTGCTCAGTGCTTTCACATTTTTGCTCGTGCGGCGGCCGAATTGCACGAGGGTCGTGCTAACGTTAGGTTCGCTTGGTACGGTGCGTCCGGTAAGGAAGAGATAGCTGATATCGCCCAACATGGTTTCGGCCACGCCCACTGTAACGGCCTGCGTCTCTCTCCGCTGGATTGCCCACTCCAAAGGCACGCTGTCAAGAGCTCCGGTGTAGACAGTGACGGCGTGAGGTACTTGTTGTTGTGTAGCGTTATAATGGGGAAGACAGAGGTGGTACCACGTGGCTCCAATCAACGACGTCCCAGTTCTGAAGAGTACGATTCTGGGGTGGACGATCTTTCGGCTCCCAAGGAGTATGTTATTTGGTCTAACCGGATCAACACTCATGTTTTGCCCGAATATGTTTTGAGTTTCACGCTTCCTTCCTTGAAAGGGAATGCGAATATTGGGGGACCTTTGAGGCCCTCTTCGCCATGGATGCCATTCCCAGCTTTGATTTCGGTGCTTTCGAAGATTTTGCGTGCAGATCAAGTTGCCATCATTGTCAAGATACGCAAAGATTATACAGAAATGAAAATTTCTCGGCATGAGATGATACAGAGAGTGAGAAATATAGCAGGTGACAAATTGCTAGTTTCCATCATCAGATCTTTCAGAGCCAAGAAAACACCAGCAAGCTTTAAAGCAAACAAGGGGAAACAAGGGCAAGGGGAAAGAAGAGCAAGGGGACAGCCAGTAGCATGA 987 0.5127 MDRPIHHSSDTPTYVSDDESVVSDCESGVSGDEGTFSGAFLPAPQDGLRVRTRFVRSLLLNGLMPEVLSIAKNAHSSVMARARAQCFHIFARAAAELHEGRANVRFAWYGASGKEEIADIAQHGFGHAHCNGLRLSPLDCPLQRHAVKSSGVDSDGVRYLLLCSVIMGKTEVVPRGSNQRRPSSEEYDSGVDDLSAPKEYVIWSNRINTHVLPEYVLSFTLPSLKGNANIGGPLRPSSPWMPFPALISVLSKILRADQVAIIVKIRKDYTEMKISRHEMIQRVRNIAGDKLLVSIIRSFRAKKTPASFKANKGKQGQGERRARGQPVA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00668 328 ProSiteProfiles RST domain profile. 234 305 IPR022003 -
Vimu7g00668 328 Gene3D - 45 220 - -
Vimu7g00668 328 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 53 301 IPR044964 -
Vimu7g00668 328 MobiDBLite consensus disorder prediction 304 328 - -
Vimu7g00668 328 MobiDBLite consensus disorder prediction 1 29 - -
Vimu7g00668 328 SUPERFAMILY ADP-ribosylation 75 220 - -
Vimu7g00668 328 ProSiteProfiles PARP catalytic domain profile. 1 240 IPR012317 GO:0003950
Vimu7g00668 328 Pfam RCD1-SRO-TAF4 (RST) plant domain 235 300 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00668 Vimu-Chr7 6684336 6687050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00668 - - gmx:100784311 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00668 7 6684336 6687050 Vimu10g01228 10 12221988 12224459 PCT