Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00666 AAAGCATTGAAGTTGTCGTTCAAACTTCGAGACTCTGAGAGAGTGTGCGAGAGAGAGATGGCGCACACAGGTAACAGTTCAATGCACCGGTCGAGTTCGCGGCCTCAATTGTTGGATCTCAGCAAAGCAGAAATTCAAGGAAACGTGGAAGAGAAGTATCCATCTATTTTGCTACCCAATCAGTCTCATGATATATCGTACCTCGCTCTTGACATTGGAGGATCTCTTATAAAGTTGGTGTACTTTTCAAGACACCAAGATCAATCAACCAATGATAAAAGGATGAGAAATGTGAAGAATCGACTGGGGTTTCCCAGTAACAGGAGAAGCTATCCTATTCTTGGTGGAAGGCTTCATTTTGTGAAATTTGAGACTCGGAAGATTAGCGAGTGCTTAGACTTCATTTATTCAAAAAAGCTTCACTTCGGTGGAGGGGAATCTCGTTATTCTGATGGCTCAACTGAATTAAATGCCATAATTAAGGCTACTGGTGGTGGAGCACACAAATTTGCTGACCTCTTCAAAGAAAGACTTGGACTTGTTCTCGACAAAGAAGATGAAATGAGCTGCCTTGTGGCAGGAGCAAATTTCTTGCTGAAGGCGATTCGTCATGAAGCTTTTACGCACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACCCTAATGATTTGTTTCCATATCTTCTAGTTAATATTGGATCTGGTGTAAGCATGATCAAGGTTGATGGGGATGGAAAATTTGAGAGGATCAGTGGGACTAATGTTGGTGGTGGTACTTATTGGGGCCTGGGCAGGCTGTTAACAAAGTGTGAGAGCTTTGATGAATTACTTGAGCTGAGTCAGAAAGGAGATAATAGAAATACTGACATGCTTGTTGGGGACATTTATGGTGGCATGGACTATGCTAAGATCGGCCTATCAGCTTCTACCATTGCTTCAAGTTTTGGCAAGGCTACCTCAGAAAAAAAGGGGCTTGAAGATTACAGACCTGAAGATATATCACTCTCTCTTTTGCGAATGATATCATACAATATTGCCCAAATAGCCTACTTAAATGCATTGCGATTTGGGTTGAAGAGAATATTTTTTGGAGGATTTTTTATACGGGGTCATGCCTATACCATGGATGCTATTTCTTTTGCAATTCATTTCTGGTCTAATGGGGCTGCACAAGCAATGTTTTTGCGACATGAAGGATTTCTGGGAGCATTAGGTGCATTTATGAGCTACGAAAAGCATGGTTTAGATGATCTCATGGTGCATCAATTAGTTGAAAGATTCCCAATGGGCGCTCCATATACGGGAGGCAATATTCATGGTCCCCCACTCAGGGATTTGAACGAGAAGGCAAGGGAGAGGAATTGGAAAACCTTAATGTTTGCTGATCACCTAATGTCCCAATATAGTGTTCGGACTCAGATTTCTTGGATGGAGAAGTTTCTGCAAAAGGGAACTGAGATCACTGCCCCTGTCCCAATGACTCGTCCTGGAACCACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTATTCTGCGGTCTGATGCTAGCGCTCTAAATGTTGGTGTCCTTCATCTAGTACCCACTTTAGAGGTGTTTCCACTATTAGCAGACCCGAAAATGTATGAACCTAATACTCTTGATCTCTCAGATCACAGTGAATTAGAGTATTGGTTCAAAATTTTGTCGGAAAACTTGCCTGATCTTGTGGCCAAGGCCGTAGCAAGTGAAGGTGGGACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACCTGACTAGGTTAATGGAGGAACCTGCTGCATACGGCAAGTTAGGCCTGGCCAGACTGCTGGAAATGAGGGAAGAGTGCCTGAGGGAATTCCATTTTTTTGATGCTTATATAAGTATAAAGCAGAGGGAAAATGAGGCATCAATTGCAGTCTTACCTGATTTGTTGATGGAGCTTGATAGTCTGGATGAGGAAACAAGACTACTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCATGTGTGGATCTCTATAATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAACAAAATGCAGAGACCCTGGCGAGTGGATGACTTTGATGTCTTTAAGGAGAGAATATTAGGAACTGGGGACAAGAAACCACCACCACATAGAAGAGCTTTACTTTTTGTGGATAATTCAGGTGCAGACATTGTTCTTGGGATGCTTCCACTGGCACGAGAACTCCTCCGTCGTGGAACTGAAGTGGTCCTGGTTGCAAATTCCCTTCCTGCGTTGAATGATGTGACTGCAATGGAGCTTCCTGACATTGTTGCCGAGGCTGCCAAGCACTGTGACATTCTTAGGCGAGCTGCTGAATCTGGTGGCTTGCTTGTTGATGCAATGAGTACTACCTTGGACAGTCCTAGAGAAAATTCGTCTTCCGTTCCCTTGATGGTTGTTGAGAATGGATGTGGTAGCCCTTGTATAGACTTTAGGCAGGTCAGCTCTGAGCTGGCTGCTGCTGCAAAAGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAATCTCAATGCCCGGTTTAAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAGAGATTTGCTGAAAAGCTGATTAAAGGGAACATATACGACTGTATTTGCAAATACGAGCCAGCTAACTGA 2733 0.4318 KALKLSFKLRDSERVCEREMAHTGNSSMHRSSSRPQLLDLSKAEIQGNVEEKYPSILLPNQSHDISYLALDIGGSLIKLVYFSRHQDQSTNDKRMRNVKNRLGFPSNRRSYPILGGRLHFVKFETRKISECLDFIYSKKLHFGGGESRYSDGSTELNAIIKATGGGAHKFADLFKERLGLVLDKEDEMSCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERISGTNVGGGTYWGLGRLLTKCESFDELLELSQKGDNRNTDMLVGDIYGGMDYAKIGLSASTIASSFGKATSEKKGLEDYRPEDISLSLLRMISYNIAQIAYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSNGAAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGNIHGPPLRDLNEKARERNWKTLMFADHLMSQYSVRTQISWMEKFLQKGTEITAPVPMTRPGTTGLGGFEVPLSKGSILRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTLDLSDHSELEYWFKILSENLPDLVAKAVASEGGTDDAKRRGDAFARAFSAHLTRLMEEPAAYGKLGLARLLEMREECLREFHFFDAYISIKQRENEASIAVLPDLLMELDSLDEETRLLTLIEGVLAANIFDWGSRACVDLYNKGTIIEIYRMSRNKMQRPWRVDDFDVFKERILGTGDKKPPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAESGGLLVDAMSTTLDSPRENSSSVPLMVVENGCGSPCIDFRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRFAEKLIKGNIYDCICKYEPAN 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00666 910 FunFam Pantothenate kinase 2 546 632 - -
Vimu7g00666 910 Pfam Fumble 68 408 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vimu7g00666 910 FunFam Pantothenate kinase 1 67 204 - -
Vimu7g00666 910 SUPERFAMILY Actin-like ATPase domain 66 205 IPR043129 -
Vimu7g00666 910 FunFam Pantothenate kinase 2 59 218 - -
Vimu7g00666 910 NCBIfam type II pantothenate kinase 68 409 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vimu7g00666 910 Gene3D - 60 218 - -
Vimu7g00666 910 SUPERFAMILY AF1104-like 526 908 IPR036075 -
Vimu7g00666 910 PIRSF PanK_long 20 910 IPR015844 GO:0004594|GO:0015937
Vimu7g00666 910 Pfam Damage-control phosphatase ARMT1-like domain 618 896 IPR002791 -
Vimu7g00666 910 SUPERFAMILY Actin-like ATPase domain 178 410 IPR043129 -
Vimu7g00666 910 Gene3D - 289 399 - -
Vimu7g00666 910 FunFam Pantothenate kinase 2 290 399 - -
Vimu7g00666 910 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 711 908 - -
Vimu7g00666 910 PANTHER PANTOTHENATE KINASE 661 800 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vimu7g00666 910 Gene3D - 547 631 IPR035073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00666 Vimu-Chr7 6655214 6669927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00666 K24265 K09680 gmx:100783082 1580.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00666 7 6655214 6669927 Vimu10g01238 10 12380581 12398896 ECH
Vimu7g00666 7 6655214 6669927 Vimu7g00666 7 6655214 6669927 ECH
Vimu7g00666 7 6655214 6669927 Vimu10g01238 10 12380581 12398896 PCT