Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00657 ATGCAATCGTTATCGTTAAGTATGAGTCTGAGGAGTGGTAGTGCAGCGAATTTACTGTTGCTGGGTTCGGAGGCGAGAGTGAGAAGAAGAAGCAGAGGTGTGATCGTAGCGTGTGCTTCGGAGGGAGACAGTGGTAGCAGTAGCACCAGCTCCTTTCTTTCTCGGACCCAAACCTACGCTCTTCTTAAGCAACAGTTGCAAGTAGCTGCTAAATCTGAGGATTACAAGGAAGCTGCTAGAATTCGAGATTCGTTGAAGTTGTTTGAGGAAGAGGAGCCTGTGTTGCGTCTGAGGAGACTATTGAAGGAAGCAATTGCGGAAGAGAGATTCCAGGATGCTGCTAGTTATCGTGATGAGCTAAAAAAAATTGCCCCACACTCTCTTTTAAAATGCTGCAGTGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGTTATACTTCTTCGCATATAGAATAAGAATTACCAATAACTCAGACCACCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACTGATGCTAATGGGAAGACGGAAAATGTCTGGGGAATTGGAGTTGTTGGTGAACAGCCGTTAATACTTCCTGGGAATAGTTTTGAATACTCTTCAGCCTGCCCACTGAGCACACCAAATGGAAGAATGGAAGGTGACTATGAAATGATCCATGTTGAAAGAGTAGGCTCACGATCATTCAATGTGACCATAGCCCCGTTTTCTCTCTCTCTTCTTGGAGATGATGAAGGTTGTAATATTTGA 798 0.4398 MQSLSLSMSLRSGSAANLLLLGSEARVRRRSRGVIVACASEGDSGSSSTSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLLKEAIAEERFQDAASYRDELKKIAPHSLLKCCSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDHPVQLLRRHWIITDANGKTENVWGIGVVGEQPLILPGNSFEYSSACPLSTPNGRMEGDYEMIHVERVGSRSFNVTIAPFSLSLLGDDEGCNI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00657 265 ProSiteProfiles UVR domain profile. 91 126 IPR001943 GO:0005515
Vimu7g00657 265 PANTHER OS05G0170800 PROTEIN 39 261 - -
Vimu7g00657 265 ProSiteProfiles UVR domain profile. 56 91 IPR001943 GO:0005515
Vimu7g00657 265 SUPERFAMILY ApaG-like 136 255 IPR036767 -
Vimu7g00657 265 Hamap Protein ApaG [apaG]. 133 264 IPR023065 -
Vimu7g00657 265 Pfam UvrB/uvrC motif 96 123 IPR001943 GO:0005515
Vimu7g00657 265 ProSiteProfiles ApaG domain profile. 134 261 IPR007474 -
Vimu7g00657 265 Gene3D ApaG domain 130 260 IPR036767 -
Vimu7g00657 265 Pfam ApaG domain 152 235 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00657 Vimu-Chr7 6583041 6588787 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00657 - K06195 gmx:100784413 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00657 7 6583041 6588787 Vimu7g00657 7 6583041 6588787 ECH
Vimu7g00657 7 6583041 6588787 Vimu10g01258 10 12681893 12683543 PCT