Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00633 ATGGAGTCCACAATCTCAATTTGCGACGCAGAGATCTCTCTTCAAACGCAAAAAATCAACGCTTTCACCGCTTCTTTTTCCGAATCCCTCCACTCTCTCCTACACACAGTGCAAGAAACCGCTCGCTGTCAAGGGTTTCCGTTCTCACACTCTCTCTCTTCTTTCTTCCCAGTTCAACTAGACGAGGCAAAAGATAAACTGAGAGACACTGAGGATGATTTGGTCAAAGCACTTGCCGTCAAGACTCGCAAAGAGGCCAAGCGAATGGCTTTGGTGGATGCTATTGCTTCTACAAAGGCTAGAGTTCAAGAACTCGATGCAATTATTCAGGAGCAGCGTACCAAAAAACAAGCATATGCTGCAATTCTATCTCAACAATCTCTTGGGGAATTAAATGAAAGTGTTGAACAGAAAGATGAAACGCAAGAGGTCGTTTCCTGGTACAATACGGTCCTTGGTTTTCATGTAAAAGGCGGACGTGGGGTAAAATTCACATTCAAGAATATAAATATGAACAATCCAAATGAGGAGTACTTTTTTACTATCCTCCATGGAAAGGATACATATTCATTATTAAGTTGTGAACCTTCCCTCGGTGAAACCAAAGAGTTGATCCACGAATTAAACAACACAAATGATTTATTTAAATTTGTCAGAGTAATGAGGAAAAAGTTCCAAGAAGCAGTGGCACAAGGGAGTTTAGTCGAGACAGCTGGTGAACATGAAGAGTCTGCTTTTAACTCTGCATCTGCTCCAGTTTTGTCAATGTCATCTGTTAGAAGTGATTTTCCGGGCAAGGAAAATGAACATCAAGTTGAGCCTATAGAAGGTAATACAAAAGTCGGAAAAATACATGTTAATAGAAGGTTAAAAGCAGTTTTATCTCCTGGATCTGCATCATCTGTTCGCCAGTCTCCTCGTTTGAAGGTATGA 933 0.4094 MESTISICDAEISLQTQKINAFTASFSESLHSLLHTVQETARCQGFPFSHSLSSFFPVQLDEAKDKLRDTEDDLVKALAVKTRKEAKRMALVDAIASTKARVQELDAIIQEQRTKKQAYAAILSQQSLGELNESVEQKDETQEVVSWYNTVLGFHVKGGRGVKFTFKNINMNNPNEEYFFTILHGKDTYSLLSCEPSLGETKELIHELNNTNDLFKFVRVMRKKFQEAVAQGSLVETAGEHEESAFNSASAPVLSMSSVRSDFPGKENEHQVEPIEGNTKVGKIHVNRRLKAVLSPGSASSVRQSPRLKV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00633 310 Pfam Chromosome segregation protein Spc25 158 226 IPR013255 GO:0007059|GO:0031262
Vimu7g00633 310 Coils Coil 95 115 - -
Vimu7g00633 310 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 3 277 IPR045143 GO:0007059|GO:0031262
Vimu7g00633 310 Gene3D Chromosome segregation protein Spc25 133 233 - -
Vimu7g00633 310 FunFam Probable kinetochore protein spc25 133 231 - -
Vimu7g00633 310 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00633 Vimu-Chr7 6352532 6355423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00633 K11550 - gmx:100776032 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00633 7 6352532 6355423 Vimu7g00633 7 6352532 6355423 ECH
Vimu7g00633 7 6352532 6355423 Vimu10g01288 10 13169761 13172395 PCT