Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00632 ATGAAGGCAACACTGCGATACTTAGCAGGCATTGCTGGCCCAAGTGGTTTCGGCTCAAATTCAACAGCTGAACAAGTCACTCAAGATTTCTCTTCCTTCCTCCCTTCAAATCTAACCGCTCTCATCACTGGTGCGACTTCTGGAATCGGAGCTGAAACAGCAAGGGTGTTGGCAAAAAGAGGAGTGAGAGTGGTGATTGGTGCGAGGGACTTGAAAAAGGCGAGGGAAGTGAGAGAGAAAATCCAAAAGGAGAGTCCTGGTGCTGAGGTTATTCTGCTGGAGATCGATCTTAGCTCTTTTGCTTCTGTACAGAGATTTTGCTCTGAGTTTTTAGCTTTAGATTTGCCTCTTAATATTCTCATGAATGTACTCTCAGAACTTGGAATTCTCCGAAGACAAAATCGAAATGACATTTGCTACAAATTACTTAGGACATTTTTTGTTAACGAAAATGCTGGTAGAGAAAATGATAGATACGGCACAGAAGTCAGTTATAATGGCACACGCGCATATGCTCAGTCAAAACTGGCAACAATTCTGCATGTGAAGGAAGTGGCAAGACAACTGAAGGAAAGGAATGCAAAGGTAACGATTAACGCAGTGCATCCCGGAATTGTGAAGACGGGAATTATCAGGGCGCATAAGGGCTTAATAACGGATTCCCTGTTTTTCATTGCATCAAAGTTACTGAAATCGATATCACAGGGAGCATCAACGACGTGTTATGTTGCGCTAAGTGGAAAAACGGAAGGAGTGAGTGGAAAATATTTTACAGATTGTAACGAGAGTAACTGCTCAAGTCTTGCAAACGAGGAATCGGAAGCAAGAAAGCTATGGAATGATACCTATGCATTGCTTCACAAACGGTTACGTCAAGCAACAAATTGA 888 0.4268 MKATLRYLAGIAGPSGFGSNSTAEQVTQDFSSFLPSNLTALITGATSGIGAETARVLAKRGVRVVIGARDLKKAREVREKIQKESPGAEVILLEIDLSSFASVQRFCSEFLALDLPLNILMNVLSELGILRRQNRNDICYKLLRTFFVNENAGRENDRYGTEVSYNGTRAYAQSKLATILHVKEVARQLKERNAKVTINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSISQGASTTCYVALSGKTEGVSGKYFTDCNESNCSSLANEESEARKLWNDTYALLHKRLRQATN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00632 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 263 IPR036291 -
Vimu7g00632 295 Pfam short chain dehydrogenase 39 122 IPR002347 -
Vimu7g00632 295 PRINTS Glucose/ribitol dehydrogenase family signature 171 190 IPR002347 -
Vimu7g00632 295 PRINTS Glucose/ribitol dehydrogenase family signature 194 211 IPR002347 -
Vimu7g00632 295 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Vimu7g00632 295 Gene3D - 39 133 - -
Vimu7g00632 295 Gene3D - 134 265 - -
Vimu7g00632 295 PANTHER RETINOL DEHYDROGENASE 14 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00632 Vimu-Chr7 6347611 6349779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00632 40 99 Lipid Metabolism Gene Families AT1G24470 38.333 2.49e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00632 - - gmx:100776567 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00632 7 6347611 6349779 Vimu7g00632 7 6347611 6349779 ECH
Vimu7g00632 7 6347611 6349779 Vimu10g01289 10 13179583 13183777 PCT