Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00598 ATGTGGACAGTTAAGGTACCTAAAAACATAACACAGATTCCTCAGATTTCTCTGCAACCATCTGCAGACTTAGATTCCCTCTCAAACTCACCCTTCTTCCAGAAAATTGGAAGGTGGATTAAAAGGGCACATGCAAGAGTGATAGGAAGATCCTTTCAAACAAGGAAGAAATATGATGAGTCTTATCTCGGAAAGCTAACCCTCGGCACTACAGTTGTTCTTTTGACCTATGATAGTCCGATGTCATGTGGTGTTATGAATATAGATGACTCCCAAGTTAGTAAAAATCTATACACCAAATCTGATGAAAAATACAAGCTGGGTCCTCTGCATCTAACTGTGCCTGGAACAGAGAAGCAGCACGGTGACGATCATGGAGCGGTGACCCGTTCGGGCCAGAGCGTCTACATGTCTGTGTACAGAACAAAGGTTGCGGATCACTGCCGTTTGATCACCATCACATGGTGCAAAAACCTCTTGCTTCACGGGCTTTCGGTGTCAGTGGAAGGCCCTGAAGGAGAAGAACAGTACACGTGCAAGGTGGAGGTAAAGCCCTGGTACTTTTGGAGGAAGCAAGGCTCCAAACGCTTCATAGTGGATGGTAAAGCAGTTGATATTTTCTGGGACCTTAAGGCTGCGAAATTTAACGGTGAAACGGAACCAACCTCGGAGTACTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTGCTGCTGCTGGGTGATCTAAAGAAAGAGGCATACAGAAGGACGGGGTGCAGGCCAGCACTCATTGACCCCATTTTGGTTTCAAAGAAAGAGCATATTTTTGGGAAGAAAAAGTTCTCCACAAGAGCCAAGTTTCATGAGAAGGGTAGGTGGCACGAGATTTCAATTGAGTGCAAGAACAAGGGATATAATGGGGAGTCTCCGAGTGGGGTTCAGCCAGAGATGGAGATAAGGATTGATGGGCACTTGGTGATTCATGTGAAGCACCTCCAGTGGAAGTTTAGAGGCAACGAGTCAATTCATCTTAGCAAAATGAGAGTAGAGGTATATTGGGATGTTCATGATTGGCTATTTAGTCCTGGTTTAAAGCATGCTTTATTCATTTTTAAGCCAATTTTATCACCCAGTACCACCAGCACTTCTTCTATGTCATCTTCGTCACCATCGTTATCATCCTCATCACCTCCCTTATCTACTGATCAGACAAGAAGTTCTAGATCAGTAGAGGGATTTAGTGTTAGTGGATCATCAGAGTTTTGCTTGTTTCTCTATGCTTGGAAGGATGAGATTGGGTTGAGAGAGAGAAGAGAGAAAGAGAATTGGGTTTGGTTGAGATTGAGAAAGGCAGTGGGGCCAAACAGTGGCTTGGGAGTTAGTTACAGCTGGGGTTGA 1377 0.4466 MWTVKVPKNITQIPQISLQPSADLDSLSNSPFFQKIGRWIKRAHARVIGRSFQTRKKYDESYLGKLTLGTTVVLLTYDSPMSCGVMNIDDSQVSKNLYTKSDEKYKLGPLHLTVPGTEKQHGDDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGEEQYTCKVEVKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNKGYNGESPSGVQPEMEIRIDGHLVIHVKHLQWKFRGNESIHLSKMRVEVYWDVHDWLFSPGLKHALFIFKPILSPSTTSTSSMSSSSPSLSSSSPPLSTDQTRSSRSVEGFSVSGSSEFCLFLYAWKDEIGLRERREKENWVWLRLRKAVGPNSGLGVSYSWG 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00598 458 PANTHER EXPRESSED PROTEIN 125 422 IPR008586 -
Vimu7g00598 458 MobiDBLite consensus disorder prediction 375 400 - -
Vimu7g00598 458 Pfam Plant protein of unknown function (DUF868) 131 422 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00598 Vimu-Chr7 6061785 6064075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00598 130 424 EF-hand Containing Proteins AT5G28150 38.851 3.61e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00598 - - gmx:100779755 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00598 7 6061785 6064075 Vimu7g00598 7 6061785 6064075 ECH
Vimu7g00598 7 6061785 6064075 Vimu10g01323 10 13860457 13862403 PCT