Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01323 ATGCAAGACGCAATTGGGATTCCAGCTTGCTTCTCTTCCGCTTTGAAATCAAGTGATGATCACACAACCGTGACCCGTTCAGGCCAGAGCGTGCACATGTCCGTCTACAGAACAAAGATTGCTGACCACTGCCGCTTGATCACCATCACATGGTGCAAAAACTTGATGCTCCATGGCCTCTCTGTCTCAGTGGAAGGCCCAGAGGGGGAGGCACAGTACAGCTGCAAGGTCGAGCTCAAACCATGGTACTTTTGGAGAAAACAAGGTTCCAAGCGCTTCCTCGTACACGGTAACAAAGCCGTTGACGTTTTCTGGGACCTTAAGGCTGCGAAATTCAACGGGGAGACAGAACCAACCGCGGAGTACTACGTTGCAGTGGTGTGCGAGCAAGAGGTGGTACTCCTGGTGGGTGATTTGAGGAAAGAAGCGTACAGAAGAACCGGGTGCAGACCAGCACTGATTGACCCGATTCTGATTTCGAAAAAAGAGCACATCTTTGGGAAGAGAAAGTTCTCAACAAGAGCGAAGTTTGAGGAGAAGGGTAGGTGCCATGAGATCTCAATCGAGTGCAAGAACAAAAGCGACATTGGAGGGGAATCGCCGTCAAATGGGATTCAAGTTCAGCCAGAGATGGAGATAAGATTGGATGGGCACGTGATGATCCACGTGAAACACTTGCAGTGGAAGTTCAGAGGGAACGAATCAATTCATCTGAACAAGATGAGAGTGGAAGTGTATTGGGATGTGCACGATTGGCTCTTTAGTCCTGGTTTGAAACACGCTTTGTTCATTTTTAAACCTGTTTTATCATCCATGTTGTCCATGTCTGTGTCATCATCTTCGCCACCGTTATCGTTGTCGTCAACATCCACACCATTATCGACTCAAACGGGAAGCTCTGGATCCTTGGAGGGGTTCAGTGTGAACGAATCATCAGAATTTTTCTTGTTTCTATATGCTTGGAAGGTTGAGTAA 975 0.4779 MQDAIGIPACFSSALKSSDDHTTVTRSGQSVHMSVYRTKIADHCRLITITWCKNLMLHGLSVSVEGPEGEAQYSCKVELKPWYFWRKQGSKRFLVHGNKAVDVFWDLKAAKFNGETEPTAEYYVAVVCEQEVVLLVGDLRKEAYRRTGCRPALIDPILISKKEHIFGKRKFSTRAKFEEKGRCHEISIECKNKSDIGGESPSNGIQVQPEMEIRLDGHVMIHVKHLQWKFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSSMLSMSVSSSSPPLSLSSTSTPLSTQTGSSGSLEGFSVNESSEFFLFLYAWKVE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01323 324 PANTHER EXPRESSED PROTEIN 7 322 IPR008586 -
Vimu10g01323 324 Pfam Plant protein of unknown function (DUF868) 27 322 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01323 Vimu-Chr10 13860457 13862403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01323 7 324 EF-hand Containing Proteins AT5G28150 37.771 3.65e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01323 - - gmx:100816323 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01323 10 13860457 13862403 Vimu10g01323 10 13860457 13862403 ECH
Vimu7g00598 7 6061785 6064075 Vimu10g01323 10 13860457 13862403 PCT