Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00576 CAATACTGGTCTGGAAGTGCCGTCAACGAGAACAAAGGAATGGTAGATAATTTGCAGAGTTATGGAATTATTACTTCCAGAAAGGTAGGTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTGCCTGGTGGACTTCAACCTTATGTTGACAGTCCTATGCCGATAGGCTACAATGCTACTATCTCTGCGCCACATATGCATGCAACGTGCCTTCAGTTGCTGGAGAAGAATTTGCAGCCTGGGATGCGTGCTCTGGACGTTGGCTCTGGAACGGGATACCTCACTGGATGCTTTGCCTTGATGGTAGGACCTCAAGGCCGTGCTGTTGGCGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGCTGCAGCTCAACCACTGAAAGATGGTTCCCTTTCAGTGCATTGTGGTGATGGGAGGCAAGGTTGGCCTGATTTTGCTCCATATGATGCCATTCATGTGGGAGCAGCGGCACCAGAAATTCCTCAACCACTTATTGACCAGTTGAAGCCGGGTGGTAGAATGGTTATTCCTGTTGGGAACATATTTCAAGATTTAAAGGTCTTGGACAAGAACTCCGATGGTTCTATCAGTATCCGGACTGAGACTTCAGTTCGGTATGTGCCTCTCACTAGCAGAGAAGCTCAGTTACGTGGTTAG 684 0.4591 QYWSGSAVNENKGMVDNLQSYGIITSRKVGEVMETIDRALFVPGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRALDVGSGTGYLTGCFALMVGPQGRAVGVEHIPELVSFSIENIKKSAAAQPLKDGSLSVHCGDGRQGWPDFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVLDKNSDGSISIRTETSVRYVPLTSREAQLRG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00576 227 FunFam Protein-L-isoaspartate O-methyltransferase 2 227 - -
Vimu7g00576 227 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 222 - -
Vimu7g00576 227 NCBIfam protein-L-isoaspartate O-methyltransferase 10 224 IPR000682 GO:0004719|GO:0036211
Vimu7g00576 227 Gene3D Vaccinia Virus protein VP39 3 227 IPR029063 -
Vimu7g00576 227 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 198 IPR029063 -
Vimu7g00576 227 CDD AdoMet_MTases 84 187 - -
Vimu7g00576 227 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 IPR000682 GO:0004719|GO:0036211
Vimu7g00576 227 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 225 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00576 Vimu-Chr7 5863528 5865182 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00576 K00573 - gmx:100527082 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00576 7 5863528 5865182 Vimu7g00576 7 5863528 5865182 ECH
Vimu7g00576 7 5863528 5865182 Vimu10g01345 10 14138787 14141043 PCT