Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04324 ATGGCAGACAACCTAGACGACGGCGAGTTCTGGCTCCCGCCGCAGTTCCTCGCCGACGATGACGCCCCGGTCACTCCCTTTCAGGGAAAGCGTCAGCCTTTGCAGCACGACGCCCTCGTCTTCCCTTCCGAGTTCCCGTACGGGTTCCCTTCCTCTGAACTTGCTTCTCCGGTTGATTCCACCGCAGGTGGCTCCAGCGAGACCGAGAGCGACGAGGAGGAGCAGCTCGTTGCTGAGTTGTCTCTCCGTCTAGCTCGGTCCTCCCTCCAAACCGATAACAAGTCTGTGGGTCGGGTTTTGTCCGGTTCACCACAATCAACTCTTTGTGCTTTTGGAAGTGGTTGTGGTTGTGGCAAAGGGTCAAGCCAGGGCAGCCCTGATGGTGTTTGTAAGATGTCTTCTGCGAAAACCACTTGGGATCTGCTGCATGCGGCTGCAGGGGAAGTGGAAAGGATGAGGTTAAGTCAAGAGGGCTTTTCTTTAAACCAACACAATGGAAACATGGTTCCCCAAAGGAAGCCCTCTCCTATTACCACCCTTCCATCCAAAACGGCTTCCTCAACCACCCCTGATGGCGGATTCTACTCCCATCAACCACTCTCTCATCACCAGCAGTTGCAAATTGCACATTTTCAATTGCTGAGGCAGCAACAGCTGGCAAAGCAGCAGAACCCTGTGTGGAATGTGCAGAAGCAATGTGGAGGGGTTTACTCCCACAGGCAACAACAAATGGTTGCCAATAGAGGGAGGAATATTGAAGTTAGTGGGAGGAACGTCAGGCCTTTGGGCTTGTCTGCGTCTGCATGGCCTCCTCTGCAACATGCGAAGCAACAAAATCAGCAATATGGCTCTGGTATGCGTGCTCTCTTTCTTGGAAACCCTTCTGGGAGAAGGGAATGTGCTGGCACAGGAGTGTTTCTCCCTCGGCGAGTGGATAGTCCTGCTGAACCACGAAAGAAGCCAGCCTGTTCAACTGTGCTGGTTCCAGCGAGAGTGGCGCAGGCCCTAAATCTGAATCTCGATGATATGGTGGGGGGGCAGCCGCAGCAAATGCAACGATTTAACCCTGGTACCAACTTGGAAAATGGTGCAGCTGTTTCAAGGCTGAGGAGTAATTATGTCCTTTCTCAACAGAAACGCAACCTCAAGTCTCAGCCAGCAGTATACCATGAGTTCAGGCTGCCACAGGAGTGGACATACTGA 1203 0.5312 MADNLDDGEFWLPPQFLADDDAPVTPFQGKRQPLQHDALVFPSEFPYGFPSSELASPVDSTAGGSSETESDEEEQLVAELSLRLARSSLQTDNKSVGRVLSGSPQSTLCAFGSGCGCGKGSSQGSPDGVCKMSSAKTTWDLLHAAAGEVERMRLSQEGFSLNQHNGNMVPQRKPSPITTLPSKTASSTTPDGGFYSHQPLSHHQQLQIAHFQLLRQQQLAKQQNPVWNVQKQCGGVYSHRQQQMVANRGRNIEVSGRNVRPLGLSASAWPPLQHAKQQNQQYGSGMRALFLGNPSGRRECAGTGVFLPRRVDSPAEPRKKPACSTVLVPARVAQALNLNLDDMVGGQPQQMQRFNPGTNLENGAAVSRLRSNYVLSQQKRNLKSQPAVYHEFRLPQEWTY 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04324 400 MobiDBLite consensus disorder prediction 1 29 - -
Vimu6g04324 400 MobiDBLite consensus disorder prediction 51 74 - -
Vimu6g04324 400 MobiDBLite consensus disorder prediction 162 200 - -
Vimu6g04324 400 PANTHER TIP41-LIKE PROTEIN 1 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04324 Vimu-Chr6 46860226 46862031 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04324 - - gmx:100795977 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04324 6 46860226 46862031 Vimu6g04324 6 46860226 46862031 ECH
Vimu6g04324 6 46860226 46862031 Vimu6g01777 6 16101689 16103346 ECH
Vimu6g04324 6 46860226 46862031 Vimu1g00963 1 6802677 6804190 ECH
Vimu6g01777 6 16101689 16103346 Vimu6g04324 6 46860226 46862031 ECH