Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00963 ATGGATGAAGCTGACTTTGACGCCGCGTTTGCCTTCCCCTCCGAGTTTCCCTATGAGTTTCACTCGCCTGGGCTCGAACCGCTTGAGTCCGCTTCCACTGGGACCGAGAGCAGCGACGAGGAGGACTTCTTCGCCGGCTTGACTCGCCGCCTCGGTCATGCATCGCTTCATGACACCAGGAAGGAACAGATGCTCACTGTTCCAATCTGCAACGCTGAAAAAACTGAGAGCCAGAAACTGATGACTCGGGGTTTGGCTGGGTCGCCTCAGTCTATACTCAGTGGAATCGGAAGCTGGTCTGGTCGGAGTGGCGGTTCCGGCGACGGGAGTCCCAACGGGTCTTCTCGTGTTCCTTCGCCAACGACGACGCCGTTTAAGCCTACAAATGATGCGTGGGATGTACTGTACGCGGCCGCAGGGCAAGTTGCGAGGTTGAGGATGAACGACGAAGTCTCTTCGAAGTTTGAGTTTCAGAACGGGGGTGTTTTTGGGGGTGTTTCTCCGCCAGTAGTCGCGGAGAGTGCGTTTTTCGTGAACCATGGCGGTCCACAGGCTCGGTACCCGCAGGTGAGACCTGAGCAGATGCTGAAACAGCAGTGTGGTTCGGTTTGGGGAAGTCAAGAGAAGGTTGCTTGGGTGACCCAGCAGCACCAGCCACAAGTTCAGAACAGAGTACGTGACTTGCGTGATTTTGGGTATGACTATGAAGCCATGAACTGCATACGCGCCTTGCCTCATTCTGCATGGCGCCGTCCTCTTCAAGCGAAACCCCAGAATCAGCAGGTGTCGCATTTCGGATCAGGGTCACGACCCGGTTTGCAAGCTGGATCTGGCGTTGTCAACAAAAAGGGTTGCGCTGGAACAGGGGTTTTCCTGCCACGTCAGTATGGGGCACCTCCACAGGAATCTCGCAAGAAAACAAGTTGTGCTGCTCCGGTTCTGGTCCCAGCTAAGGTTATCCATGCTTTGAACCTCAACATTGATGACATCAATGCCACTAGCCAACAACGCTTCTCTAGTGCATTTGGGCCGGACTATGATGCTTTGTTAGCAAGGAGAAATGCTCTTATCCTTCAACAGAAGTTCAGCATGCGGCGAGAGGAGGCAGCCAACCATGAACTTTGCTTGCCTCAAGAATGGACGTACTGA 1149 0.5422 MDEADFDAAFAFPSEFPYEFHSPGLEPLESASTGTESSDEEDFFAGLTRRLGHASLHDTRKEQMLTVPICNAEKTESQKLMTRGLAGSPQSILSGIGSWSGRSGGSGDGSPNGSSRVPSPTTTPFKPTNDAWDVLYAAAGQVARLRMNDEVSSKFEFQNGGVFGGVSPPVVAESAFFVNHGGPQARYPQVRPEQMLKQQCGSVWGSQEKVAWVTQQHQPQVQNRVRDLRDFGYDYEAMNCIRALPHSAWRRPLQAKPQNQQVSHFGSGSRPGLQAGSGVVNKKGCAGTGVFLPRQYGAPPQESRKKTSCAAPVLVPAKVIHALNLNIDDINATSQQRFSSAFGPDYDALLARRNALILQQKFSMRREEAANHELCLPQEWTY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00963 382 PANTHER TIP41-LIKE PROTEIN 3 382 - -
Vimu1g00963 382 MobiDBLite consensus disorder prediction 21 41 - -
Vimu1g00963 382 MobiDBLite consensus disorder prediction 80 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00963 Vimu-Chr1 6802677 6804190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00963 - - gmx:100816574 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01777 6 16101689 16103346 Vimu1g00963 1 6802677 6804190 ECH
Vimu6g04324 6 46860226 46862031 Vimu1g00963 1 6802677 6804190 ECH
Vimu1g00963 1 6802677 6804190 Vimu1g00963 1 6802677 6804190 ECH
Vimu6g01777 6 16101689 16103346 Vimu1g00963 1 6802677 6804190 PCT