Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04255 ATGTCTTGTGCTGTGGACTCAGTTCGAGATCCTTTCAAAAACTCATGGAAAACCTTTCGTTTTCCCAACATCAAACCCACCGAACTTCTCTTTTTCTTCTTCAAAGCTGGTCTTGCAGCTTCAACCTTCTTCCTCATAACCCTAATTGTTCACCTTACACTATCCTACAACCAATCCCATTACCATAACAACAACCATGCATCCTTCAAATACGTGCTCCAACAACAGAAAGCCACTCACCAACCACCACCCACCAACATCTCCCACCTCCTCTTCGGTATTGGTGGCTCCGTCGCCACGTGGGAAACGCGCCGCCAATACTCCGACATGTGGTGGCGTAGCGGCGTCACCAGAGGCTTCGTGTGGCTCGACAGCCACCCATCTGGGAACGCGACGTGGCCCGAGACTTCACCGCCGTATAAGGTGTCCAGTGACACGTCGGCGTTCCAGTATACGTGCTCGTACGGGTCGCGATCCGCTATTCGTGTGGCGCGGATTTTGAAGGAGAGCTTCGAGCTGGGGATGGAAAACGTGAGGTGGTTTGTAATGGGTGATGACGACACCGTTTTCTTCACCGACAACCTGGTTATGGTGTTGTCGAAGTATGATCATAATGAAATGTACTACGTGGGTGGGAATTCTGAGAGTGTGGAACAGGATGTGATACACTTTTACACTATGGCGTTTGGTGGTGGTGGGTTTGCCATAAGTTACCCTTTGGCGAAGGAGTTGGTGAGAATTTTGGACGGTTGCATTGATCGTTACGCAGAGTTTTATGGGTCTGATCAGAAAATTCAGAGTTGTATCAGTGAGATTGGTGTTCAGGTCACCAAAGAACCAGGATTTCATCAGGTAGATATACGTGGGAACCCATATGGGTTGTTAGCGTCACATCCGGTGGCACCGTTTGTTTCCTTGCACCACTTGGATTATGTGGACCCGATATTTCCCGGCATGACCCGTGTTGGCGCCGTTAAAAAACTGGTATCCGCCTACGAAAAGGATACGGGTCGGACTCTACAGAAGAGCTTCTGTTACGACCTCAGACGAAACTGGTCCGTTTCGGTGTCGTGGGGCTACAGCGTTGAGATATACCCCTCTCTACGCACGGCCAAGGAACTAGAAACGGCGTTTCGGACTTTCCGCACGTGGCGGAGCTGGAGTGATGGCCCGTTTACTTTCAATACCCGAACCCTTAGTTCCGACCCGTGTGAGAAACCAGTCGTGTATATGCTGGATCGGGTTCTCAGCTATGACGGGGACACGTCCCGGTCTATCTATAGAAGATACGAAGACTCACCGGGGAACGTGTGCACGCGTGATGACTATGCGCAGGCTTTAGACGTGCAATACGTCGACGTTTTTGCTTCACGCTTTACGGCAGATGTGTGGAAAAAGGCGCCACGTAGGCAATGCTGCGAGGTAATGAAGGGCTCAGATAGAGTAAAGAATAATAGCGTGGTTGGCGTGAAGATCAGAGGGTGCCATCGATTCGAGAGTGTGACTCCTCTGTAG 1515 0.5063 MSCAVDSVRDPFKNSWKTFRFPNIKPTELLFFFFKAGLAASTFFLITLIVHLTLSYNQSHYHNNNHASFKYVLQQQKATHQPPPTNISHLLFGIGGSVATWETRRQYSDMWWRSGVTRGFVWLDSHPSGNATWPETSPPYKVSSDTSAFQYTCSYGSRSAIRVARILKESFELGMENVRWFVMGDDDTVFFTDNLVMVLSKYDHNEMYYVGGNSESVEQDVIHFYTMAFGGGGFAISYPLAKELVRILDGCIDRYAEFYGSDQKIQSCISEIGVQVTKEPGFHQVDIRGNPYGLLASHPVAPFVSLHHLDYVDPIFPGMTRVGAVKKLVSAYEKDTGRTLQKSFCYDLRRNWSVSVSWGYSVEIYPSLRTAKELETAFRTFRTWRSWSDGPFTFNTRTLSSDPCEKPVVYMLDRVLSYDGDTSRSIYRRYEDSPGNVCTRDDYAQALDVQYVDVFASRFTADVWKKAPRRQCCEVMKGSDRVKNNSVVGVKIRGCHRFESVTPL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04255 504 Pfam Protein of unknown function, DUF604 219 473 IPR006740 -
Vimu6g04255 504 Gene3D - 77 322 - -
Vimu6g04255 504 FunFam Fringe-related protein-like 76 333 - -
Vimu6g04255 504 PANTHER FRINGE-RELATED 42 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04255 Vimu-Chr6 44874658 44876848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04255 7 503 Glycosyltransferase AT2G37730 54.864 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04255 - - gmx:100813750 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04255 6 44874658 44876848 Vimu6g04255 6 44874658 44876848 ECH
Vimu6g01809 6 16367062 16368930 Vimu6g04255 6 44874658 44876848 ECH