Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01809 ATGAGTTATTTCAAATGTAGCAGGGAGAAGATGTGTCAAACTCGCTTGGAACTTTGTCATGAGTCTTCTCTTAAAGCATCCAGAGTATCTTTTATCCCTGAAAGACTTGGTGATATTGTTATACTCTTAATAAGGTTTGGTATACTTGTGTGCCTTGTTGCCTCCATATCACTAGCTCTCCACTCAGCATTTGCTAAACCAGACCGATGGTTCCCCTTACCCGAGCATATACATACTGTACAGAATACTTCTGTCATTGACAGCGGACCAACAAACATCTCACATATTCTGTTTGGCATCGGTGGGTCATCTAACACTTGGCATGACCGCAGCAACTACAGCAAACTATGGTGGAATCCAAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCTAAGATTCTGCGTGATGACATGCTTCTACCATATCAAATCTCAAAGGGCTGGAAGCGGTTCCAGTATGTGCATTCAGCATCTGCAGTTCGGATTTCCCGGATAGTTCATGAGAGCTTTAAACTTGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGATGATGATACTGTGTTCTTTACTGAGAACTTAGTTACTGTGTTGAGAAAATATGATCACAACCAGATGTATTATATTGGTGGGAGTTCTGAGAGTGTTGAGCAAGATTTGATGCATTCTTATGACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCTGCTCAACTAGCCAAAATAATGGATGGTTGTCTAAGCAGATACTACTACTTTTATGGTTCTGATCAAAGGGTTTGGGCCTGTGTGAATGAAATTGGGGTGCCTCTTACCAGAGAAGGTGGATTCCACCAGCTTGATATAAGAGGGGATCCATATGGTCTTCTAGCTGCACACCCTTTGGTACCACTTGTATCTCTCCATCACCTTAACCAATTGAACTCCTTGTTTCCCAACCAGACTCAATTTCACTCAATGGAAAAGCTCGTCAGTGCATACCACGTTGACCCTGCCCGGACAGTGCAGCAAAGTTTTTGCTATGATCATAAGCATAGATGGTCAATATCCATCTCATGGGGTTACACCATACAAATATATCCATTTTTGTTGATAGCATCAGACTTGCAGATGCCACTGCAGACATTTAGGACTTGGCGAAGTTGGAAAGACGGTCCCTTCACATTCAATACGAGACCAATGAGCTCTGACCCGTGTCAGAAGCCAGCTATGTTTTTCCTGGATGAGGTTACAGAAGTGGGAAAAAGTGGAAGTGTCACTATCTACAAGAGACATGAAGGCAGTGAAGGGAAGTGCACGAGAGAAGGCATTACTAACGTGGAAGTGGAAAGCATTACAGTTTCTGCCTTGAAGCTGGACCCAGAATATTGGAAAAGTGTATTGCGCAGGCATTGCTGCCAATCATTGGCGGGTGGAAGCATAAACAATGGTAGTATGCATATCAGGATTAGGAAGTGCAGACCTCAAGAAACCATTACTATTTAG 1503 0.4291 MSYFKCSREKMCQTRLELCHESSLKASRVSFIPERLGDIVILLIRFGILVCLVASISLALHSAFAKPDRWFPLPEHIHTVQNTSVIDSGPTNISHILFGIGGSSNTWHDRSNYSKLWWNPNTTRGFVWLDKKPKILRDDMLLPYQISKGWKRFQYVHSASAVRISRIVHESFKLGLPNVRWFVMGDDDTVFFTENLVTVLRKYDHNQMYYIGGSSESVEQDLMHSYDMAFGGGGFAISYALAAQLAKIMDGCLSRYYYFYGSDQRVWACVNEIGVPLTREGGFHQLDIRGDPYGLLAAHPLVPLVSLHHLNQLNSLFPNQTQFHSMEKLVSAYHVDPARTVQQSFCYDHKHRWSISISWGYTIQIYPFLLIASDLQMPLQTFRTWRSWKDGPFTFNTRPMSSDPCQKPAMFFLDEVTEVGKSGSVTIYKRHEGSEGKCTREGITNVEVESITVSALKLDPEYWKSVLRRHCCQSLAGGSINNGSMHIRIRKCRPQETITI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01809 500 Gene3D - 86 351 - -
Vimu6g01809 500 Pfam Protein of unknown function, DUF604 220 472 IPR006740 -
Vimu6g01809 500 PANTHER FRINGE-RELATED 38 498 - -
Vimu6g01809 500 FunFam Fringe-related protein-like 83 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01809 Vimu-Chr6 16367062 16368930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01809 20 498 Glycosyltransferase AT3G11420 53.722 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01809 - - gmx:100802549 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01809 6 16367062 16368930 Vimu6g01809 6 16367062 16368930 ECH
Vimu6g01809 6 16367062 16368930 Vimu6g04255 6 44874658 44876848 ECH