Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03563 ATGGGGCACAAGAACACAATTTTGTTGGCACTGTTTGTTGCTTTGATCACAAATGAGGCCATGGCAGAAGAACATGTAGTTGGTGGAAGCCAAGGTTGGGATGCATCCACAGATTTTAAGTCTTGGGTTTCAGGCCAAACATTTAATGTTGGCGATCAACTTGTTTTCAAGTACTATTCTGGGCTGCATAGTGTGGTTGAACTAGGTAGTGAGGGTGAGTACCAGAATTGTGATCTTGGTAATGCAGTGAACTCAATGAACAGTGGCAATGATGTTGTGAAACTGAACAAGCCTGGTACACGTTACTTTGCATGTGGTACTTTAGGTCATTGTGGTCAAGGTATGAAGGTGAAGATCACAATTGCATCATCATCTTCTTCTTCTTCACCTACTTCATCTTCATCCTCACTATACTTCAGCTCTCTTTTGCTCATTGTTGCGTTTTTCATTGCCTGTCTACTTATACAGTTTTGA 474 0.4135 MGHKNTILLALFVALITNEAMAEEHVVGGSQGWDASTDFKSWVSGQTFNVGDQLVFKYYSGLHSVVELGSEGEYQNCDLGNAVNSMNSGNDVVKLNKPGTRYFACGTLGHCGQGMKVKITIASSSSSSSPTSSSSSLYFSSLLLIVAFFIACLLIQF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03563 157 CDD Phytocyanin 24 121 - -
Vimu6g03563 157 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Vimu6g03563 157 SUPERFAMILY Cupredoxins 21 121 IPR008972 -
Vimu6g03563 157 FunFam Blue copper 21 127 - -
Vimu6g03563 157 PANTHER BLUE COPPER PROTEIN 21 129 IPR039391 GO:0009055
Vimu6g03563 157 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Vimu6g03563 157 Gene3D - 21 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03563 Vimu-Chr6 32900522 32901091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03563 1 121 Miscellaneous Gene Families AT3G27200 60.656 6.56e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03563 - - gmx:100305865 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03563 6 32900522 32901091 Vimu6g03563 6 32900522 32901091 ECH
Vimu8g00571 8 12128456 12129312 Vimu6g03563 6 32900522 32901091 PCT