Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03111 GAGAAGCTTGATACTTTTAGGAGGCTTATTGGGAAGGGTGATGGTGACCCTTTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGCAGTGTTTTTGCAGCTTTGTTGCAAGATTCTTATGGTCAATTCAGGGACAAGATACAGATCAGGATTTGGAGAAGAGCAGGAAGGGCAGTGGATAGAGGCACTGCAGAACATCTCTTTGAGGTCATAAACTCAAGGGAAGATGTGCTGAGAAGGTGGTCACAAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTCAATGGTTTGCCTTCTACAGAAACACGTGAGATCTTTGAAGAGATTAGTAAGTATTGGAAGGAGAGGATCACAGTGCCTATAA 369 0.4472 EKLDTFRRLIGKGDGDPLRIVSVGAGAWGSVFAALLQDSYGQFRDKIQIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRWSQTCRKLFGMLILWSMVCLLQKHVRSLKRLVSIGRRGSQCL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03111 122 Gene3D - 2 80 - -
Vimu6g03111 122 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03111 Vimu-Chr6 27452511 27453009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03111 1 88 Acyl Lipid Metabolism Gene Families AT2G41540 81.818 2.29e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03111 K00006 - gmx:100781512 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03111 6 27452511 27453009 Vimu6g03111 6 27452511 27453009 ECH
Vimu6g03111 6 27452511 27453009 Vimu3g00457 3 4479170 4480960 PCT