Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00457 GCCTGCAATGGTTCAGAGGAGAAGCTTGATGATCTTCGCAGCCTTGTTGGGAAGGCTGATGGTGATCCTTTGAGAATTGTGAGTGTTGGTGCTGGTGCTTGGGGCAGTGTTTTTGCTGCTTTGTTGCAAGATACTTTTGGCCAATTCCGTGATAAGGTGCAAATCAGGATATGGAGAAGGCCAGGAAAGACAGTTGATAGAGCAACAGCAAAACACCTCTTTGAAGTTATCAACTCCAGGGAGGATCTGGAGTGCCTATGGAGAATATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCTCGAATATGTGGAGCTGATAAATGGAGGAAACCTCTGGCAAAGTTTCTACGACAACCTCATTTTATTGTCTGGGACAACAGTGACCTTGTCACCCATGAAGTCATGGGTGGCTTGA 444 0.4527 ACNGSEEKLDDLRSLVGKADGDPLRIVSVGAGAWGSVFAALLQDTFGQFRDKVQIRIWRRPGKTVDRATAKHLFEVINSREDLECLWRIYFILVVQILPQKSTTRSMPMLEYVELINGGNLWQSFYDNLILLSGTTVTLSPMKSWVA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00457 147 Gene3D - 6 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00457 Vimu-Chr3 4479170 4480960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00457 6 83 Acyl Lipid Metabolism Gene Families AT2G41540 76.923 1.22e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00457 K00006 - gmx:100797552 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00457 3 4479170 4480960 Vimu3g00457 3 4479170 4480960 ECH
Vimu6g03111 6 27452511 27453009 Vimu3g00457 3 4479170 4480960 PCT