Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03022 ATGTTCAACGATCCATTAATCATGAGTTCAACGAGCCATGGCTCAGAGGATCATGAAGAAGAAGATGAACAAGTTAGAGAAATCCACGCCTTAACACCAACTCATCCTCCCCACCCACGTGGCAGACCCTGGGACACCCTTCACACCCACCGTTCAAGCTCCCTCTCCGTCGCCAGCACCGACGGTGGCGCCTCCTCCTCCGACAACTTCACCACCATGAGCAGAGAGTTCAACGCCTTGGTTCTCGCAGGCTCCACCATCGACCCCGACAACAACCGCAACCTAACTCCCGTCAACCAAAACAACGTGAACAACAACCTGGGGAGGATCAGAGAAGATGAGTTGATGGAAGAGACGAACCCTTTGGCAATCGTGCCGGATAACCACCCTCTGGACCCGGTTCCCTCGTCCCAAATGGGTGGTGGTGGTGGTGCACGTGAAGAGCACGTGTCGGTGCAGAGGGTGAAGAAGGAGGAGGTGGACACGAAGATATCAGCGTGGCAGAACGCGAAGGTTGCGAAGATTAACAACAGGTTCAAGAGAGAAGACGCTGTGATCAATGGGTGGGAGAGCGAGCAAGTTCAGAAAGCTTCCTCTTGGATGAAGAAAGTTGAGGTAATACTTTTATTTTTCTCGCGTGGGTTGAATGGTTTCTTTGAGGTTATGATTACTGTTATTACGCTTGAGACTGAAACAGGCTTGGATTCATTCATCATGGTCCAATCAGTACATGGTCAGAGGAAGCTGGAGGAGAAAAGGGCAAGAGCAATGGAGAAAATGCAAAATGACATAGCAAAAGCTCATAGAAAAGCAGAGGAGAGAAGGGCATCAGCAGAAGCCAAAAGAGGAACGAAAGTGGCAAGGGTTTTGGAGATTGCAAGTCTCATGAGAGCAGTTGGAAGACCTCCTGCCAAAAAGTCCTTCTTCTAA 930 0.5 MFNDPLIMSSTSHGSEDHEEEDEQVREIHALTPTHPPHPRGRPWDTLHTHRSSSLSVASTDGGASSSDNFTTMSREFNALVLAGSTIDPDNNRNLTPVNQNNVNNNLGRIREDELMEETNPLAIVPDNHPLDPVPSSQMGGGGGAREEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVEVILLFFSRGLNGFFEVMITVITLETETGLDSFIMVQSVHGQRKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03022 309 MobiDBLite consensus disorder prediction 124 154 - -
Vimu6g03022 309 MobiDBLite consensus disorder prediction 13 29 - -
Vimu6g03022 309 Coils Coil 246 277 - -
Vimu6g03022 309 Pfam Remorin, C-terminal region 159 304 IPR005516 -
Vimu6g03022 309 PANTHER OS02G0116800 PROTEIN 132 305 - -
Vimu6g03022 309 MobiDBLite consensus disorder prediction 48 67 - -
Vimu6g03022 309 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03022 Vimu-Chr6 26701715 26703671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03022 - - gmx:100527684 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03022 6 26701715 26703671 Vimu6g03022 6 26701715 26703671 ECH
Vimu6g03022 6 26701715 26703671 Vimu3g00405 3 3925239 3927252 PCT