Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00405 ATGCTGAATTATCAAACACCTTCCACAAGCCATGACAGAGAGGAGCAAAGCGACTACACTGATAATGAACAACAGATCAGAGAAATTCATGCCTTGACCCCACCCCCCAGAAGAGAGCCTAACTGGGAAACACACACACACAGCCACCGCTCTTCTTCTGTGTCCATAGAAGGTGGTTCCAGCGAGAACTTCAGCGTGAGTAGGGAATTCAGTGCCCTTGTTCTAGCAGGCTCAAGTATTGATCACAACACCACCACCCCTAGTCCCATGAGTGTGAATATGATGCATGGCAATGAAGGAGGTGGTAATAGCAGCATTAACAACGACAACAACAATAGCAACAACTTGGGGAGGATTGGAGAGGATGAGTTGCTGATGATGGAAGAGACTAACCCTTTGGCTATTGTGGCAGATAGCAATCCTTTGGGAGCTGATTCCTCATCATCACCTCCGAGACGTGGAGGGAACTCTTCTTCTTCAGCTTCTGGTACTGCTCTGAGTGAGGTTACAGTGCAGAGGGTGAGAAAGGAGGAGGTTGAAGCAAAGATATCAGCTTGGCAAAACGCTAAGGTTGCTAAGATTAACAACAGGTTCAAGAGGGAAGATGCTGTTATAAATGGGTGGGAGAATGAGCAGGTTCAGAAAGCAACTTCATGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAGAGCACTGGAGAAAATGCAAAATGAGATAGCAAAAGCTCACAGAAAAGCTGAGGAAAGGAAGGCATCAGCAGAGGCTAAAAGGGGCACAAAAGTAGCCAGGGTTCTGGAGATTGCCAACCTCATGAGAGCAGTTGGAAGAGCACCTACCAAAAGATCTTTCTTTTAA 864 0.4653 MLNYQTPSTSHDREEQSDYTDNEQQIREIHALTPPPRREPNWETHTHSHRSSSVSIEGGSSENFSVSREFSALVLAGSSIDHNTTTPSPMSVNMMHGNEGGGNSSINNDNNNSNNLGRIGEDELLMMEETNPLAIVADSNPLGADSSSSPPRRGGNSSSSASGTALSEVTVQRVRKEEVEAKISAWQNAKVAKINNRFKREDAVINGWENEQVQKATSWMKKVERKLEEKRARALEKMQNEIAKAHRKAEERKASAEAKRGTKVARVLEIANLMRAVGRAPTKRSFF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00405 287 MobiDBLite consensus disorder prediction 141 169 - -
Vimu3g00405 287 MobiDBLite consensus disorder prediction 11 25 - -
Vimu3g00405 287 Pfam Remorin, C-terminal region 178 283 IPR005516 -
Vimu3g00405 287 MobiDBLite consensus disorder prediction 47 61 - -
Vimu3g00405 287 MobiDBLite consensus disorder prediction 1 61 - -
Vimu3g00405 287 MobiDBLite consensus disorder prediction 136 169 - -
Vimu3g00405 287 Coils Coil 220 259 - -
Vimu3g00405 287 PANTHER OS02G0116800 PROTEIN 70 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00405 Vimu-Chr3 3925239 3927252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00405 - - vun:114191978 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03022 6 26701715 26703671 Vimu3g00405 3 3925239 3927252 PCT