Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02989 ATGCTGACTGACTTAGAAGCCGATTTTATCAACCCATATGATGCTTCATCAAGGATTAATTACTTCATCGTTCCTGAGTTTATTGGGCAGGGATTGTTGTGCGCTTTCTGCCTTTTAACAGGTCACTGGATCATGTTTTTGATGACGGTTCCTGTTACATGCTACCATGTGATGCTGTACATGAAACAGCAGCATCTCATCGATGTTACTGAAGTGTTTAGAGCACTTAACTCCGAGAAGAAATTTCGCTTGGCCAAACTTGCGTATTACTTAACAATCATCATTATAACTGTCTTCAGGTTAGTTTGTGCTGCCCTTAAAATAGCATATCATTATCTACTATATTTTTTTGTTTTACATTCTCACTGCTTAATATTATATCTATTTATTTTTCTGATTAATGTGATGCATTGGGATTGTGTTAGGCAAGCCAGCCTGTTTTTTGTTACTATTAGTTAA 459 0.3617 MLTDLEADFINPYDASSRINYFIVPEFIGQGLLCAFCLLTGHWIMFLMTVPVTCYHVMLYMKQQHLIDVTEVFRALNSEKKFRLAKLAYYLTIIIITVFRLVCAALKIAYHYLLYFFVLHSHCLILYLFIFLINVMHWDCVRQASLFFVTIS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02989 152 PANTHER CORNICHON-RELATED 2 103 - -
Vimu6g02989 152 SMART Cornichon_2 1 99 IPR003377 GO:0016192
Vimu6g02989 152 Pfam Cornichon protein 1 99 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02989 Vimu-Chr6 26352447 26354178 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02989 K20368 - gmx:100527262 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02989 6 26352447 26354178 Vimu6g02989 6 26352447 26354178 ECH
Vimu6g02989 6 26352447 26354178 Vimu3g00354 3 3378225 3383038 PCT