Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00354 ATGGTCTCAGACTGCACAACTATAGATGCAATAAAAGTATTTCTTTCTGAAGCAGTATTAGGTGCTGAAACTGTGTTGCTACAGGTGAGTTTCTTGCTCCTCAAAGAACCTTTCAGCTCTAGTGATCCACAAAGAAGGTTCCCCTATAAAATCTGGCAGCTCATCCTTCATGATCCACTTATCCTGCATCCCTGGTATGTAAAAAGAGAGCATCTTATTGATGTTACTGAGGTATTTAGGGTAGTTAATGCTGAGAAGAAATTTCGGATAGTGAAACTTGCTTTATACTTAACGGTTCTCATTGTTACTATCTTCAGGCTTACATTAATCGCAGTCTACTATTTAGGCATTGAAGACGATGATGACCTAGGACACCTTTGGTAA 384 0.3906 MVSDCTTIDAIKVFLSEAVLGAETVLLQVSFLLLKEPFSSSDPQRRFPYKIWQLILHDPLILHPWYVKREHLIDVTEVFRVVNAEKKFRIVKLALYLTVLIVTIFRLTLIAVYYLGIEDDDDLGHLW 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00354 127 Pfam Cornichon protein 51 105 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00354 Vimu-Chr3 3378225 3383038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00354 K20368 - gmx:100500341 114.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00354 3 3378225 3383038 Vimu3g00354 3 3378225 3383038 ECH
Vimu6g02989 6 26352447 26354178 Vimu3g00354 3 3378225 3383038 PCT