Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02944 ATGGGGGCTGGTGGCCGAACCTTTGTCCCTCCTTCCAACGGGAAATCAAAGGCCGACCCTCTGAAGCGGGTGCCATTTGAAAAACCTCCTTTTAGCCTCAGCCAGATCAAGAAGGCCATACCACCTCACTGTTTTCAGCGCTCTGTTCTCCGTTCATTCTCCTATGTCATTTATGATCTAACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTACTTTCACATCCTTCCCCGACCTCTGCCTTTCCTTGCATGGCCAATCTACTGGGCTGTCCAAGGTTGTATCCTCACTGGCGTTTGGCAGCTGCTTGATGATATCGTTGGCCTTGTTCTCCATTCTGCTCTCCTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCATCACTCCAACACCGGTTCTCTCGAGCGGGATGAAGTATTTGTGCCAAAGCAGAAGTCCGGTATGCAGTGGTACTCTAAATACCTTAACAATCCACCAGGCAGAGTCCTCACACTAGTCGTCACCCTCACTCTTGGTTGGCCCATGTACCTGGCTTTTAATGTGTCAGGCAGGCCTTATCCAAGGTTTGCTTGCCACTATGATCCTTATGGTCCTATTTACTCTGATCGTGAACGACTTCAAATATATATATCAGATGTTGGAGTACTTGCAGTATGCTATGGCCTTTACCATCTTGCCATGGCAAAAGGGCTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCGTTGCTAGTGGTCAATGGATTTCTGGTGTTGATTACATTCTTGCAGCATACTCACCCTGCATTACCCCACTACAATTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTGGCAACAGTTGACAGAGATTATGGAATTCTGAACAAGGTCTTCCATAATATTACAGACACTCATGTAGCACATCACTTGTTCTCCACGATGCCGCATTATCATGCAATGGAGGCCACAAAAGCAATAAGGCCCATTTTGGGAGAGTATTATCGGCTTGACGAGACTCCATTTGTGAAGGCAATGTGGAGAGAGGCAAGAGAGTGTGTTTACGTGGAGCCAGATCACGAGACTGAGAACAAAGGTGTATTTTGGTACAACAATAAGTTGTGA 1110 0.4721 MGAGGRTFVPPSNGKSKADPLKRVPFEKPPFSLSQIKKAIPPHCFQRSVLRSFSYVIYDLTIAFCLYYVATHYFHILPRPLPFLAWPIYWAVQGCILTGVWQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGMQWYSKYLNNPPGRVLTLVVTLTLGWPMYLAFNVSGRPYPRFACHYDPYGPIYSDRERLQIYISDVGVLAVCYGLYHLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYNSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYRLDETPFVKAMWREARECVYVEPDHETENKGVFWYNNKL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02944 369 CDD Delta12-FADS-like 47 315 - -
Vimu6g02944 369 MobiDBLite consensus disorder prediction 1 23 - -
Vimu6g02944 369 Pfam Fatty acid desaturase 100 331 IPR005804 GO:0006629
Vimu6g02944 369 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 16 368 IPR012171 GO:0016491
Vimu6g02944 369 Pfam Domain of unknown function (DUF3474) 28 66 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02944 Vimu-Chr6 25976523 25977674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02944 1 369 Lipid Metabolism Gene Families AT3G12120 72.063 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02944 K10256 - gmx:547815 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02944 6 25976523 25977674 Vimu6g02944 6 25976523 25977674 ECH
Vimu6g02944 6 25976523 25977674 Vimu3g00313 3 2960335 2961492 PCT