Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02933 ATGATGGTGAAGGGAATCCAGATTCAGATATGTGGATTGGTAAGTCAACGATGGATTCAGAAACCCCGGGCATTCTCATCCTTCTCATTTTCCTCAATCCCACACCCTAACCCTTATTCCAAATTGCTTCCCACCAAAACCATCGTTCGTAGGGTTCGATTCGCGCCATTTCACGCTTCCTCGACACCGCTTCCTTCTGCCGGAAATGTTCGACACATTAAGTTCTGTCAGTGGTGTGGTGGTTCTACGAAGAATGATATTCCCGAAGGGGAAGAAAAGTTAAGAGCTATATGTACGGTTTGTGGGAAGATTGCGTATCAGAATCCGAAAATGGTAGTTGGCTGCCTCGTTGAACATGATAACAAGGTGCTCCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACACTTCCTGCTGGTTATTTGGAAATTGGAGAGTCGGCTGTGGATGGTGCCATAAGAGAAACAAGGGAGGAAGCAAATGCAGATGTGGAAGTAATTTCACCATTTGCCCAACTGGATATTCCTTTAATTGGCCAAATTTATTTGATATTCTTGGCAAAGCTGAAGAAGCCGCATTTTTCACCTGGTCCAGAATCATCAGCATGCCAACTTTTTCCTCTTGACGATATACCTTTTAATTCTCTATCCTTTTCATCGATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGACTGGAAAACTCAAATTCCATTATGGAACCATTAACAAAAGGTATTTTCTTCCCAACTCCATATTATTCTTCCTAAATCTAATGTATTGTCTGGTTTTTGAGGGCAGGACACTATTTTACATGTGA 831 0.4176 MMVKGIQIQICGLVSQRWIQKPRAFSSFSFSSIPHPNPYSKLLPTKTIVRRVRFAPFHASSTPLPSAGNVRHIKFCQWCGGSTKNDIPEGEEKLRAICTVCGKIAYQNPKMVVGCLVEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVDGAIRETREEANADVEVISPFAQLDIPLIGQIYLIFLAKLKKPHFSPGPESSACQLFPLDDIPFNSLSFSSMVVTLSLYVEDIKTGKLKFHYGTINKRYFLPNSILFFLNLMYCLVFEGRTLFYM 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02933 276 ProSitePatterns Nudix box signature. 142 163 IPR020084 GO:0016787
Vimu6g02933 276 PANTHER NUDIX HYDROLASE 23 75 252 - -
Vimu6g02933 276 Pfam Nudix N-terminal 74 107 IPR029401 -
Vimu6g02933 276 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 108 256 - -
Vimu6g02933 276 SUPERFAMILY Nudix 74 232 IPR015797 -
Vimu6g02933 276 Gene3D - 71 107 - -
Vimu6g02933 276 ProSiteProfiles Nudix hydrolase domain profile. 108 231 IPR000086 -
Vimu6g02933 276 Pfam NUDIX domain 112 213 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02933 Vimu-Chr6 25929095 25931639 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02933 K18453 - gmx:100808417 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02933 6 25929095 25931639 Vimu6g02933 6 25929095 25931639 ECH
Vimu6g02933 6 25929095 25931639 Vimu3g00303 3 2882190 2884408 PCT