Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02917 ATGGCTCGTTACGGCGAGGGCGACAAACGGTGGATCGTCGAGGACCGTCCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGACCAACTGTCTCGAATGGTCCAGAACGTTCTTCTCTTCCCTCCTCTCCAACCTCACAATTCTTGACGGCGAAGGGAATCTTTTCATCAAAACCACCTCACTCCGCTCCCTCGACGGCGAGGCCTACATCAACGTCCGCAAGGGAAAGATCATCCCCGGCTACGAGATCAGCCTCACGCTCAATTGGCACGGCGAGGCCAAGGACTCCAACGGAGCTTCGCTTCTCCAAGTCGACGGCGCCGTCGAAATTCCCTACATATCCGACGAGAATGCCGACGAGGATCCCGAGCTCAGAATCACCGTCAACGACGAAGGACCGGTAGGGAAGAGGATCAAGGACGCAATGCTTTCCAAGGGGAAGCCATTGATCTTGGAGAAGGTTAGGGTTTGGGTGCAGAGCATGGCCAGAGGCGGTCCTGTTAAGGACGAATTGGAGAAGAAGCCGGCGCCGTCTCCGTCGCCATCACCGGCGCGGCCGGCGCCGGCTCCGTCACCGTCACCGCCCACTACGGCTGCGCCGAAGAAGGATACTTCGACGTCTACGAAGAAGAAGGAGAAGAAGGGAGTGAAGAGTATTAGTATGACTGAGAGGTTCAATTGCAGGGCGAAGGACTTGTATGAGATATTGATGGATGAAAATAGATGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAGTAAAGAGGTTGGTGGTGAGTTTAGCATTTTTGATGGATCGGTGACTGGAACTAATTTGGAGTTGCAGGAGGGTAAGTTAATTGTGCAGAAATGGAGGTTTGGAAGCTGGAACGATGGAGTTCAATCCACAGTGAGGCTTGTGTTTGAGGAGCCTGAAACGGGTGTTACGGTTGTTAAGCTGACTCATTCTGATGTGCCTGAAGAGGACAGTTATGTTTTTGTTTGGTTTGATTTTGCTAAGGTGGTTTGGTTTCCGATTGATACAGGTATGGGAATGCAACTGTTGCGGAGAACACCGAAAGGGGGTGGCGGGATCTCATCTTCCAAAGGATACGTGCGGTTTTTGGTTTTGGAATTTGAGAGTTTTGTGATTGTATTCCCTGCATTATTGAGCTAG 1161 0.522 MARYGEGDKRWIVEDRPDGTNVHNWHWAETNCLEWSRTFFSSLLSNLTILDGEGNLFIKTTSLRSLDGEAYINVRKGKIIPGYEISLTLNWHGEAKDSNGASLLQVDGAVEIPYISDENADEDPELRITVNDEGPVGKRIKDAMLSKGKPLILEKVRVWVQSMARGGPVKDELEKKPAPSPSPSPARPAPAPSPSPPTTAAPKKDTSTSTKKKEKKGVKSISMTERFNCRAKDLYEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEGKLIVQKWRFGSWNDGVQSTVRLVFEEPETGVTVVKLTHSDVPEEDSYVFVWFDFAKVVWFPIDTGMGMQLLRRTPKGGGGISSSKGYVRFLVLEFESFVIVFPALLS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02917 386 MobiDBLite consensus disorder prediction 206 221 - -
Vimu6g02917 386 Gene3D - 218 339 IPR023393 -
Vimu6g02917 386 MobiDBLite consensus disorder prediction 167 221 - -
Vimu6g02917 386 MobiDBLite consensus disorder prediction 178 199 - -
Vimu6g02917 386 Pfam Activator of Hsp90 ATPase homolog 1-like protein 231 325 IPR013538 -
Vimu6g02917 386 SUPERFAMILY Bet v1-like 220 329 - -
Vimu6g02917 386 Pfam Activator of Hsp90 ATPase, N-terminal 29 164 IPR015310 GO:0001671|GO:0051087
Vimu6g02917 386 Gene3D - 18 172 IPR036338 -
Vimu6g02917 386 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 2 164 IPR015310 GO:0001671|GO:0051087
Vimu6g02917 386 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Vimu6g02917 386 CDD SRPBCC_Aha1 220 324 - -
Vimu6g02917 386 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02917 Vimu-Chr6 25781536 25782837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02917 K26216 - gmx:100784184 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02917 6 25781536 25782837 Vimu6g02917 6 25781536 25782837 ECH
Vimu6g02917 6 25781536 25782837 Vimu3g00290 3 2714408 2715349 PCT