Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00290 ATGGCGAAGTTCGGCGAGGGTGATAAACGTTGGATCGTGGCGGACCGTGCTGACGGCACCAACGTTCACAACTGGCACTGGGCTGAGACCAACTGTCTCGAATGGTCCAGAACCTTCTTCCGAAAGCTTTTCGCCAACGTCGCCGTCGCTGACGGTGACGTCTCCGTCACCGTCAAGAAGGTGGAAAAACTCGACGGTGAGGCCTACGTTAACGTGCGCAAGGGGAAGGTGATTCCCGGGTACGAGATCGGCGTTACACTCGCTTTGGAGAGTGAGGTGCGTGGCTCCGACGGGAACCTCCTGCAGAAGGTCGATGGCGCCGTCGAGATCCCGTACATCTCCGATGAGAACGCTGGCGAGGATCCCGAGGTTAGGGTTACGGTGAAGGATAGCGGAGAGGTTGGGAAGAGGTTGAAGCAGGTGGTGGTGGAGAAGGTGAAACCGGTGATTTTGGAGAAGGTTAGGGTTTGGGTGGAGAGCATGGCGAAGGGTGGGCCAGTGAAGGATGACCTTGAAGCGAAGAAAGTGGTGCCACAGAAGAATACTAGTAGTATTAATAGTAATGGTAATGTTAATATTAATGGTAATAATGATAATGATTCGAAGAAGAATGAGAAGAGTGAAGGGAAGAAGGGGTTTAAAACGATCAATTTGACAGAGAGGTTTAATTGTAGGGCGAAGGATTTGTTTGAGATTTTGATGGATGAGAATAGATGGAGAGGTTTCACTCACAGCAATGCGAAGATCAGCAAGGAGGTTGGGGGTGAGTTTTGTATTTTCGATGGGTCTGTGACAGGGGTAAACTTGGAGTTGCAGGAAGGGAAGTTGATCGTGCAGAGGTGGAGATTTGGGAGCTGGCTTGATGGGATTCAATCCACGGTAAGTGTTATGAAAAAGTTAATTTATTTGAGTTTAGGGATTTGTTTTTGGATTGGTTTTTGA 942 0.4915 MAKFGEGDKRWIVADRADGTNVHNWHWAETNCLEWSRTFFRKLFANVAVADGDVSVTVKKVEKLDGEAYVNVRKGKVIPGYEIGVTLALESEVRGSDGNLLQKVDGAVEIPYISDENAGEDPEVRVTVKDSGEVGKRLKQVVVEKVKPVILEKVRVWVESMAKGGPVKDDLEAKKVVPQKNTSSINSNGNVNINGNNDNDSKKNEKSEGKKGFKTINLTERFNCRAKDLFEILMDENRWRGFTHSNAKISKEVGGEFCIFDGSVTGVNLELQEGKLIVQRWRFGSWLDGIQSTVSVMKKLIYLSLGICFWIGF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00290 313 Pfam Activator of Hsp90 ATPase homolog 1-like protein 226 296 IPR013538 -
Vimu3g00290 313 Gene3D - 18 173 IPR036338 -
Vimu3g00290 313 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 163 IPR036338 -
Vimu3g00290 313 SMART Aha1_N_2 29 163 IPR015310 GO:0001671|GO:0051087
Vimu3g00290 313 SUPERFAMILY Bet v1-like 215 295 - -
Vimu3g00290 313 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 163 IPR015310 GO:0001671|GO:0051087
Vimu3g00290 313 MobiDBLite consensus disorder prediction 177 198 - -
Vimu3g00290 313 MobiDBLite consensus disorder prediction 170 210 - -
Vimu3g00290 313 Gene3D - 213 299 IPR023393 -
Vimu3g00290 313 Pfam Activator of Hsp90 ATPase, N-terminal 29 163 IPR015310 GO:0001671|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00290 Vimu-Chr3 2714408 2715349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00290 K26216 - gmx:100775568 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00290 3 2714408 2715349 Vimu3g00290 3 2714408 2715349 ECH
Vimu6g02917 6 25781536 25782837 Vimu3g00290 3 2714408 2715349 PCT