Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02911 ATGCCGGGATTAGCACAAAGGAATGAACAACTCACTAATGACTCGTCGAGGTCGCAGTGTACAGTTTCTTCAAATGGATTCTGGTCGAAGAATTCCAACGACGTTTGCTACAATCAACTCCAGAAGTTCTGGAGTGAGCTGTCACTGCAAGCTCGCCAAAAGTTGTTGAGGATAGACAAACAATCCCTTTTTGAGCAAGCTCGTAAAAATATGTACTGCTCCAGGTGCAATGGGTTACTTCTTGAAGGTTTTCTTCAGATTGCTACGCATGGGAAATCTTTGCAACAAGAAGGGGTGGATGGCCACTTTCCTTGCAACAGATCCGGAGGTTTGCGAAAGCTAAACAGTGAAGGATTAAGCATTATCAATGGATGTCAAGATGAAATCCAAGATCCATCAATCCATCCTTGGGGAGGTTTGACTACAGCACGAGATGGCTCATTAACACTAATGAGCTGCTACTTGTATTCAAAGTCTTTGAAAGGACTGCAAATTGTATTCGATGGGGCACGATCCAGGGAGCGGGAAAGAGAACTGCTTTATCCTGATGCCTGTGGTGGGGGAGGCCGTGGTTGGATAAGCCAAGGAATAGCTAGTTACGGTAGAGGACATGGTACAAGAGAAACATGTGCCTTGCATACTGCCAGACTTTCATGTGATACACTACTAGATTTTTGGTCAGCACTGGGAGAGGAAACACGACTTTCCCTTCTAAAAATGAAAGAAGAAGATTTTATTGAGAGACTTATGTACAGGTTTGATAGCAAGAGATTCTGCAGAGACTGTAGAAGAAATGTTATTCGAGAGTTCAAGGAACTAAAAGAATTGAAGCGCATGCGTAGAGAACCTCGCTGCACGAGCTGGTTTTGTGTTGCTGACTCAGCTTTTCAATATGAGGTATCTGATGACTCAGTTCAAGCTGATTGGCGTCAGACATTTGCTGATGCATCAGGAACATATCATCACTTTGAGTGGGCTGTGGGGACAACCGAAGGAAAATCTGACATTTTGGAATTTGAGAATGTGGGATTAAATGGATGTGTTCGAGCCAGTGGCCTGGATCTTGGTGGTTTGAGTGCATGTTTTGTCACTCTCAGAGCTTGGAGATTAGATGGACGATGTACTGAATTTTCTGTTAAAGCCCATTCGTTGAAGGGTCAACAGTGTGTACATTGCAGGTTAACTGTAGGAGATGGTTTTGTTACAATCACAAAAGGGGAAAGTATCAGAAGATTCTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGATGATTCAATTGACAAGGATGGGAATGAGCTTGATGGAGAATGCTCCCGTCCCCAAAAGCATGCAAAAAGCCCTGAACTTGCTCGAGAATTTCTGCTAGATGCTGCCACTGTTGAAAAGGCTTTCAGAGAAGGAACAGCACGCCAAAATGCACACAGCATATTCGTCTGTCTTGCACTAAAACTGCTGGAGGATCGAGTGCATGTAGCTTGCAGAGAAATCATTACTTTGGAAAAACAGATGAAGCTTCTTGAAGAAGAAGAAAAGGAAAAACGAGAAGAAGAAGAACGCAAGGAGAGGAGAAGGACAAAGGAAAGGGAGAAAAAGCTTAGGAGGAAGGAAAGACTAAAAGGAAAAGAAAAAGAAAAAAGGTGTTCTGAATCAAATGATGCTCTTGGTTCTCCTGAAATCTCAAAGGAAGAATTGTCTGCAGTTGCTGATGTGGAGCAAAATTGTCCTAATAACTGCAGGAATTTAGTTATTGAAACAGAAGAGACTAATATATTGAGGGATGATTCTCCTAAAATCCAAGGTGAAGAATTGTGTAGTGAGGATAAAACTTTGAAACCACAAGATCTCTCTCTTGATGATTGTGAGGGAGAAATTTCAAATGCAAAAGACGAGATGGATCAGTCTACAATTGAACAATCAATGCTTTCTCATCAAAGATTAAGATGCAGGAATGAATTTCAACAGGATATGCCTATGAAGTGGTCTGACAGACGGCGATATGCAGTTGTTTCAGAAAATAGTGTGATGGTTGGCAGATCTGAACCAAGACATTGTGTAGAGAGTTTTATGACATCATCGAGGACAATGAATGGGTTGAATAGGCTATCAAGGATTAATGTCCCAACAAAATCAAATTGTCGAAATGGTGGTCCTCCCAAGTTTAATGAGAAGTTTTATAGTTCCAAGAATCGGGCAAATGAGAGATGTGATATTCATTCTTGCAGCTGTAGCTTGAGTGATGAATACAAGACAAGGGTTGAGCAACATTCTCCTATGACTAGAGTTAGTCCGGAGACAAAGCCTACATGTCAGTCTGAATCTGCAGGGGATACATCCAAGCAATTTTATCGTGGTACCAAGAATAATCAAGTAGACTATATGCACGAGAGTAATGGAAGATCCAAAAGCAAAATCATTTTGGGGAACTATCCTGGCCGGGATTTGTTTCAGTCGAAGAGAGTTTGGGAGCCTACTGAATCTCAGAAGAAATATCACAGCAGTAATTTTGAGTCTGATGTTATTTTGAGCTCCGCTAAAGTTCTAGGAACTCAGTCTGATCTGATCAAGTCATCTATTGGAGAAGCTGCTGAGTCAGGTGAAAATGATGTTGAGGAATGTAGTTCAAAGAGATTTGGTGGAGTGAATGAAAGGTGTCAAAATAGTTTTCACGTAGAAGCTGAAGGTTCTTGTAGCTCTATGGAAATTGCTTCAGAGGAACCTGGAATATGTTCAACTGTAGGCTTTGCCTTGAACAGTTGTGCTGATCCCACTCAAAGTAGCACTTTTAGCTCTGATAACTGCTCATTATGTTTAAGTGAGGGTGATAACAATACCACCTCGTCAAACCATGAAAATACAGAATCCTCAATCACATCAGATTCAGAAGATGTTGGCGGGCAATCTGAAGTAAGAAATAATTTGGATTACATGGAAAATATATTGTCTGATTGTCATGAAGTTGCCACAGAGAATAACGAGAATGCAAACGGGGAGGAGGGTTTGGTAAGAAGTTCAAGTTCACTGATTGGTCCGTCCTTTGATGGTACAACAAATTATGCATTTGGGAATCATGTGGAAACTGCCCAAAATTTTGATGCTTGTTTTCCCACCACTAATGTGTGTTCTCAGCCTCAAAGTATGTTTCCACCGTTGTCAAACCAAAATATTCATTTTCCAGTGTTTCAAGCTCCTTCAACAATGGGTTATTTCCATCAAAATCCGGTTTCATGGCCAGGAGCTCCTACAAATGGGTTGATACCCTTCCCACACACAAATCCCTATTTATATGCCAGCCCTCTTGGATATGGCTTGAATGAGGACCCACGCTTCTGCTTGCAGTATGGGGCCTTGCAGCAACCAACTCCCATTTTCAACCCTGCCATTCCTGTTCATCAGCCAGTTGCGAGGGCTAATATCTTGAATGCAGAGGTGCGGACTCGGATTTCCAAGCCAGCTTCTTTGCTACAGCATCTTAATGGATCTTTTGCAGAAAGGGTCGCTCCAGCTGGAACTATTTCCAAGAAACCAACATTATACGGAGAAGTTATACATGATAATTCTGCGAAATCACTTGACAATAGCAATGATTTTTCCTTGTTTCATTTTGGTGGACCCGTAGCCCTTTCAAAAGGATGTAAACCGGCGCACACATCTTTGAATGGAGATACTGTTGGCGATTTTGGGTCAAAAGATTCAGCAGATCATGTTGAAAATGTCCATAATTGCAATAAAAAAGAGACTCCTGCTATGGAGGAATACAATCTGTTCGCAACAAGTAATAAAGGTTTTCAATTTTCTAAAATGATAAAGTGA 3816 0.4151 MPGLAQRNEQLTNDSSRSQCTVSSNGFWSKNSNDVCYNQLQKFWSELSLQARQKLLRIDKQSLFEQARKNMYCSRCNGLLLEGFLQIATHGKSLQQEGVDGHFPCNRSGGLRKLNSEGLSIINGCQDEIQDPSIHPWGGLTTARDGSLTLMSCYLYSKSLKGLQIVFDGARSRERERELLYPDACGGGGRGWISQGIASYGRGHGTRETCALHTARLSCDTLLDFWSALGEETRLSLLKMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADSAFQYEVSDDSVQADWRQTFADASGTYHHFEWAVGTTEGKSDILEFENVGLNGCVRASGLDLGGLSACFVTLRAWRLDGRCTEFSVKAHSLKGQQCVHCRLTVGDGFVTITKGESIRRFFEHAEEAEEEEDDDSIDKDGNELDGECSRPQKHAKSPELAREFLLDAATVEKAFREGTARQNAHSIFVCLALKLLEDRVHVACREIITLEKQMKLLEEEEKEKREEEERKERRRTKEREKKLRRKERLKGKEKEKRCSESNDALGSPEISKEELSAVADVEQNCPNNCRNLVIETEETNILRDDSPKIQGEELCSEDKTLKPQDLSLDDCEGEISNAKDEMDQSTIEQSMLSHQRLRCRNEFQQDMPMKWSDRRRYAVVSENSVMVGRSEPRHCVESFMTSSRTMNGLNRLSRINVPTKSNCRNGGPPKFNEKFYSSKNRANERCDIHSCSCSLSDEYKTRVEQHSPMTRVSPETKPTCQSESAGDTSKQFYRGTKNNQVDYMHESNGRSKSKIILGNYPGRDLFQSKRVWEPTESQKKYHSSNFESDVILSSAKVLGTQSDLIKSSIGEAAESGENDVEECSSKRFGGVNERCQNSFHVEAEGSCSSMEIASEEPGICSTVGFALNSCADPTQSSTFSSDNCSLCLSEGDNNTTSSNHENTESSITSDSEDVGGQSEVRNNLDYMENILSDCHEVATENNENANGEEGLVRSSSSLIGPSFDGTTNYAFGNHVETAQNFDACFPTTNVCSQPQSMFPPLSNQNIHFPVFQAPSTMGYFHQNPVSWPGAPTNGLIPFPHTNPYLYASPLGYGLNEDPRFCLQYGALQQPTPIFNPAIPVHQPVARANILNAEVRTRISKPASLLQHLNGSFAERVAPAGTISKKPTLYGEVIHDNSAKSLDNSNDFSLFHFGGPVALSKGCKPAHTSLNGDTVGDFGSKDSADHVENVHNCNKKETPAMEEYNLFATSNKGFQFSKMIK 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 757 783 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 510 561 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 528 542 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 756 783 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 417 447 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 433 447 - -
Vimu6g02911 1271 PANTHER OS10G0105400 PROTEIN 7 963 - -
Vimu6g02911 1271 Coils Coil 619 639 - -
Vimu6g02911 1271 Coils Coil 484 537 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 510 527 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 418 432 - -
Vimu6g02911 1271 MobiDBLite consensus disorder prediction 943 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02911 Vimu-Chr6 25726814 25739421 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02911 - - vra:106757724 2427.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02911 6 25726814 25739421 Vimu6g02911 6 25726814 25739421 ECH
Vimu6g02911 6 25726814 25739421 Vimu3g00288 3 2674584 2681660 PCT