Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00288 ATGAGAGCGTGTCTGAACGGGAAAATGCCTGCGTTACCGAACGGGAATCATCAATTCTGTGCGAATGGATTCTGGTCGAAGAATCGAGACGATGTTGGCTACAATCAACTCCTCAAGTTTTGGTGTGAGCTGTCACCACAAGCTCGGTTGGAGCTCTTGAGGATAGACAAGCAAACCCTTTTTGAGCATGCACGAAAAAATATGTACTGCTCCAGGTGCAATGGGTTACTTCTTGAAGGATTTCTGCAGATTGTTACATATGGGAAATCTTTGCAACAAGAGGGAGCCGTCGTTCATTTTCCTTGTAGCAGGGCTGGAGGTTTGAAAAATCAAAATAACGGTGGATCATCCATCTGTAATGTGGTCCAGGATGAAATTCAAGATCCAAGTGTCCATCCTTGGGGTGGTTTGACCACAACGCGTGAGGGTGCACTAACACTTCTGGATTGCTACTTGTATTCAAAGTCTCTGAAAGGACTGCAAATTGTATTTGATGGAGCACGAGCTAGGGAACGGGAAAGAGAACTTCTTTATCCAGATGCATGTGGTGGGGGTGGCCGTGGTTGGATAAGCCAAGGAGTTGTGAGCTATGGCAGAGGGCATGGGACCAGGGAAACCTGTGCCCTGCACACTGCCAGACTCTCATGTGATACACTAGTGGATTTTTGGGCAGCACTAGGAGACGAGACAAGGCAATCTCTTCTAAGGATGAAGGAAGAGGATTTTATTGAGAGATTAATGTACAGGTTCGATAGCAAGAGATTTTGCAGAGATTGTAGAAGAAATGTTATTCGAGAATTTAAGGAATTAAAAGAGTTGAAGCGCATGCGAAGAGAACCTCGATGCACTAACTGGTTTTGTGTTGCTGATACTACCTTTCAGTACGAGGTATCTGATGACTCAATTCAAGTTGATTGGCGCCAGACATTTGCTGATACTGTGGGATTGTATCATCACTTTGAGTGGGCTGTGGGAACAACTGAAGGAAAATCTGACATTTTGGAATTTGAAAATGTTGGAATGAATGGATGTGTACAAGTTAGTGGCCTAGATCTTGGTGGTTTGAGTGCATGCTTCATCACCCTCCGAGCATGGAAGCTAGATGGACGCTGTACTGAACATTCTGTTAAAGCTAATGCCATAAAGGGTCAAAGGTGTGTACATTGCAGGCTTTCTGTTGGGGATGGCTATGTTACAATTACAAAAGGGGAAAGTATTAGAAGATTCTTTGAACATGCCGAAGAGGCAGAAGAAGAAGAGGATGACGATCTCATTGATGAAGATGGAAATGAACTTGATGGAGAATGTTCCCGACCCCAAAAACATGCAAAGAGTCCTGAACTTGCACGAGAATTTCTTCTAGATGCCGCCAGTGTTGAAAAGGCTTTCAGAGAAGGAACAGCACGTCAAAATGCACACAGCATATTCGTTTGTCTTGCTTTGAAACTGCTGGAAGAAAGAGTTCATGTAGCTTGCAAAGAAATCATTACATTAGAAAAACAGATGAAACTTCTTGAAGAAGAAGAAAAGGAAAAACGTGAAGAAGAAGAACGGAAGGAGAGGAAAAGGACAAAAGACAGGGAGAAAAAACTTCGGAGAAAGGAAAGACTTAAAGGAAAGGAGAAAGATACAGAAAGGAAGTGTTCTGAATCAATTGATGTTCCTGGATCTCCTGAACTTTCAAAGGACGAATTGTCTCCTGCTGCTGATGTAGAGCAGAATAATTCTATTATAGGCAGTAATTCAATCATTGTAACAGGAGATGATTATCCTAAAATCCAAGATGAAGACTTCACTCGAGAGGGTAGTAATTTGAGAGTACAAGACTACTCTTACGATGACTGTGAGGGAGACATTGCAAATGTGCAACACCACTCTTACGATGATTGTGATGGAGATATTGCAAATGCACAAGACAGGAATGGTACTTCTACCGTTGAGCAATCAAAGTTTTATTGTCAACGACTTAGATATAGGAAAGAATTTCGACTGGATCCGCCAACAAAGTGGTCTGACAGACGCTCTAATGCAGTTGTTTCAGAAAATGGTGTGGTGGTTGGAAGATCAGAGCCAGTACACTGTGAAGATAATTTTGGGATGCATTCCAGAGGAATCAATGGATTGAACAGGCAATCAAGAATAAGTGCTGCAAAATCCAATGGTCGAAATATTGGTCATAAGTGTAGTGAGAGGTTTTATAGTTCCAACGGCTGGGTGAACGACAGATATGATTTTCATTCATGCAGTTGTAATAGTAGAATGAATAGGGTTAGTTGGGAGACAAAACTTGTTAGTAAGTCTGAATCCACAGTAGATTCATCTAAGCAATTTTACCGTGGTAGCAAGTATAATCATGTAGACTTCATGTCCGAGAGTAATGGAAGAACCAAAAGCAGGGTCATCTCAGGTAACTATTCTAGTAGGGATTTGCCTCACTCAAAGAAAGTTTGGGAGCCTATGGAGTCCCACAAGAAGTATGCTCGTAGTAATTCAGACTCTAATGTTACATTGGGGTCCACAGGTCAAGTATTTCAGTTCGATATGGTAAGGTCATCTATCGATGAAATTGGTGGTACAGGTGAAGTTGATTATGTGGATTGTAATTTGAAAAGAAGCGGAGTGGATGAAGACTATCAGAATGATCTTGATGCTGAAGCTGGAGGATCTTGCAGTTCCACTGAAATTACGTCTGAGGAACCTGGAACATCTCTGATGGGTGGGTCATCCTTGAATAATTCTTCTGATCCCAATCATGGTAGCACTTCTAGTTCTGATAACTGTTCATCATGCCTAAGTGAGGGTGATAACAATACCACCTCTTCAAACCGTGAGAATACAGAATCATCAACATCTGATTCAGAAGATGCTAGCCAACAATCTGAAGTGAGAGAAAGTTCAACCTGCATTGACAACGGATTGTCTGGTTCTCATGAAGCTGGAATGGAGAAAATTCATAATGCAAATGATGAGGGCTTGACCAGCATGTCAACATTTGGTCCATCCTTGGATGCAGCAAGAGGTGATGTATTGGGGAATCCTGTGGTTAGAATGGCCGCCCATAATTTTGATAATTGTTTTTCCCCTCTTAATGTGTGTTCTCAATCTCAAAGCATGCTCCCTCCAGTGCCAAACCAAAATATACAATTTCCAGTGTTTCAGACTCCTTCGGCAGTGGGCTATTACCATCACAATCCAGTTTCATGGCCAGCTACTCCCACAAATGGGTTGGTGCATATCCCGCACCCAAACCCCTACTTATATAGTAGCCCTTATGGATATGGCTTAAACGAAGATCCGAGATTCTGCTTGCAATATGGTGGCTTACAGCAACCAACACCTTTATTTAACCCTGTTTCCGTTCCAGTTTATCAGCCATTTGCCAGAGCTAAAGGCTTAAATACGGAGGAAGCGATTCGAATGTCTAAGCCAACATCCATGCTTCAAGAGCATCTTAATATATCTACAGTGGGAAGGGTTTCTCTAAGCGGAGCTAATTCACAAAAAGCAGCAATGAATGGGGAAGTTGGAGATGGTAATTATGCCAAGACACCAGACACTGGTTTCTCCCTGTTTCATTTTGGTGGCCCTGCAGACCTTTCAACATGTCATAAATTGCCTAATGCATCTTCAAATGACGGCGACAATGTAGGAGATTTCAACAAAAAGAGTTTTGTAGATGAAGTTCAGAATGAAAACGAGACGAATGTGATGGAGGAGTACAACTTGTTTGCGGGAAGTAAATCCTTGAGGTTTTCAATTTTCTAA 3765 0.421 MRACLNGKMPALPNGNHQFCANGFWSKNRDDVGYNQLLKFWCELSPQARLELLRIDKQTLFEHARKNMYCSRCNGLLLEGFLQIVTYGKSLQQEGAVVHFPCSRAGGLKNQNNGGSSICNVVQDEIQDPSVHPWGGLTTTREGALTLLDCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGRGWISQGVVSYGRGHGTRETCALHTARLSCDTLVDFWAALGDETRQSLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTNWFCVADTTFQYEVSDDSIQVDWRQTFADTVGLYHHFEWAVGTTEGKSDILEFENVGMNGCVQVSGLDLGGLSACFITLRAWKLDGRCTEHSVKANAIKGQRCVHCRLSVGDGYVTITKGESIRRFFEHAEEAEEEEDDDLIDEDGNELDGECSRPQKHAKSPELAREFLLDAASVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIITLEKQMKLLEEEEKEKREEEERKERKRTKDREKKLRRKERLKGKEKDTERKCSESIDVPGSPELSKDELSPAADVEQNNSIIGSNSIIVTGDDYPKIQDEDFTREGSNLRVQDYSYDDCEGDIANVQHHSYDDCDGDIANAQDRNGTSTVEQSKFYCQRLRYRKEFRLDPPTKWSDRRSNAVVSENGVVVGRSEPVHCEDNFGMHSRGINGLNRQSRISAAKSNGRNIGHKCSERFYSSNGWVNDRYDFHSCSCNSRMNRVSWETKLVSKSESTVDSSKQFYRGSKYNHVDFMSESNGRTKSRVISGNYSSRDLPHSKKVWEPMESHKKYARSNSDSNVTLGSTGQVFQFDMVRSSIDEIGGTGEVDYVDCNLKRSGVDEDYQNDLDAEAGGSCSSTEITSEEPGTSLMGGSSLNNSSDPNHGSTSSSDNCSSCLSEGDNNTTSSNRENTESSTSDSEDASQQSEVRESSTCIDNGLSGSHEAGMEKIHNANDEGLTSMSTFGPSLDAARGDVLGNPVVRMAAHNFDNCFSPLNVCSQSQSMLPPVPNQNIQFPVFQTPSAVGYYHHNPVSWPATPTNGLVHIPHPNPYLYSSPYGYGLNEDPRFCLQYGGLQQPTPLFNPVSVPVYQPFARAKGLNTEEAIRMSKPTSMLQEHLNISTVGRVSLSGANSQKAAMNGEVGDGNYAKTPDTGFSLFHFGGPADLSTCHKLPNASSNDGDNVGDFNKKSFVDEVQNENETNVMEEYNLFAGSKSLRFSIF 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00288 1254 MobiDBLite consensus disorder prediction 415 430 - -
Vimu3g00288 1254 MobiDBLite consensus disorder prediction 878 978 - -
Vimu3g00288 1254 MobiDBLite consensus disorder prediction 507 524 - -
Vimu3g00288 1254 MobiDBLite consensus disorder prediction 885 973 - -
Vimu3g00288 1254 Coils Coil 481 547 - -
Vimu3g00288 1254 PANTHER OS10G0105400 PROTEIN 21 991 - -
Vimu3g00288 1254 MobiDBLite consensus disorder prediction 415 444 - -
Vimu3g00288 1254 MobiDBLite consensus disorder prediction 507 571 - -
Vimu3g00288 1254 MobiDBLite consensus disorder prediction 537 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00288 Vimu-Chr3 2674584 2681660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00288 - - gmx:100776127 2006.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00288 3 2674584 2681660 Vimu3g00288 3 2674584 2681660 ECH
Vimu6g02911 6 25726814 25739421 Vimu3g00288 3 2674584 2681660 PCT