Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02902 ATGGCCAACTCCAAAAACCTTACATGCACTTTCACCATCTTTCTCAGCCTTCTCTTTTCGTTGACAGCTGCAAAATCTTCTACTTTCTCCCGAAACCTATCTCCCATGTCTTTGGGATTCAAGAAGGAGAAGCTCAGCCACCTTCACTTCTTCTTCCATGACATTGTCAGCGGCCCAAACCCCACCGCCGTCAGAGTGGCGGAGTCCCCTTCCACCAACTCTTCCTCCACGCTTTTCGGATTCATAGCAATGATCGACGACCCATTGACTGTGGGACCCGAACCCGAATCCAAAGTGGTGGGAAAGGCTCAAGGAGTATACGGATCTGCATCCCAACACGAACTGGGTCTATTGATGGTAATGAACTTGATGTTCACGGAAGGGAAATACAATGGCAGCACACTGAGCTTGTTGGGGCGGAATGCGGTGTTCTCTACCATAAGGGAAATGCCAATAATCGGAGGAAGTAGGGCTTTTCGGTTTGCACGTGGTTATGCTCAGGCAAAGACTTACACCTTTGATTTAAAGACCGGAAATGCTGTTGTGGAGTACAACGTTTACTTCTGTCTTTCCTCACACTTCTTACTTTTCCCTACCATTGCCATGGCTAATTCAAGAAGCCTCACAGCCTTTTTCACCGTCATCGTTCTCAGCCTACTGTTCTCATTGGCCACCGCAAAATCTTCTACTTTCTACCGAAGCCTATCTCGGAAGTCTTTGGGGCTCAATAAGGAGAAGCTCAGCCACCTTCACTTCTTCTTCCACGACATTGTCAGCGGTCCAAACCCCACCGCCGTCAGAGTGGCGGAGGCCGCCTCCACCAACTCTTCTTCCACACTTTTCGGATTTATAGCTATGATGGACGACCCATTGACTGTGGGCCCCGAACCTGGATCGAAACTCGTGGGAAAGGCCCAAGGTGTTTACGGATCTGCGGCCCAACAGGAAACGGGCCTGTTGATGGTAATGAACTTCGTCTTCACTGAAGGGAAATACAATGGCAGCACGCTGAGCTTGTTGGGGCGGAATGCGGTGTTCTCCACCGTGAGGGAAATGCCAATCGTTGGAGGAAGCGGGGCTTTTCGGTTCGCACGTGGGTATGCTCAGGCAAAGACTCACACGTTTGATCTGAAGACCGGAGATGCGGTTGTGGAGTACAACGTTTACGTGTTCCATTATTAA 1182 0.5 MANSKNLTCTFTIFLSLLFSLTAAKSSTFSRNLSPMSLGFKKEKLSHLHFFFHDIVSGPNPTAVRVAESPSTNSSSTLFGFIAMIDDPLTVGPEPESKVVGKAQGVYGSASQHELGLLMVMNLMFTEGKYNGSTLSLLGRNAVFSTIREMPIIGGSRAFRFARGYAQAKTYTFDLKTGNAVVEYNVYFCLSSHFLLFPTIAMANSRSLTAFFTVIVLSLLFSLATAKSSTFYRSLSRKSLGLNKEKLSHLHFFFHDIVSGPNPTAVRVAEAASTNSSSTLFGFIAMMDDPLTVGPEPGSKLVGKAQGVYGSAAQQETGLLMVMNFVFTEGKYNGSTLSLLGRNAVFSTVREMPIVGGSGAFRFARGYAQAKTHTFDLKTGDAVVEYNVYVFHY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02902 393 Pfam Dirigent-like protein 248 391 IPR004265 -
Vimu6g02902 393 Pfam Dirigent-like protein 46 187 IPR004265 -
Vimu6g02902 393 PANTHER NUCLEOPORIN-RELATED 229 389 IPR004265 -
Vimu6g02902 393 Gene3D - 235 388 IPR044859 -
Vimu6g02902 393 Gene3D - 36 185 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02902 Vimu-Chr6 25572645 25578584 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02902 - - gmx:100816095 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02902 6 25572645 25578584 Vimu6g02902 6 25572645 25578584 ECH
Vimu6g02902 6 25572645 25578584 Vimu3g00279 3 2569973 2570539 PCT