Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02870 ATGAGGGGAAACAGTGCAGATATGGCAAGACACGTAATGTGTCCATCCCCCAACAGAAGGGTGAGCATCAGCTTCTTTAGAGTGAGGCCAGATTCCAATCAATGCCTATCACCAGTTCCTACCATGACAACTGCAATGAGTCTTTGGCAACCTGGCATTACTGGCCCATATACTTTGTCAAATGGAGCTCTAAGCGGCTATGAAGCAATGGATATGATGCCTAACTGGGGAATGTTTGGTGCTCCAATTGTTATGCTACCACCTATGCGTCCTGTGGCAGTGAACTCTCGCAAAGTTCCTCGAGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGAACATCCAGAAAACACACAAGGCATCTGCCACCTCGTGCCCAAAAAGGACGACTTATGGAATTACCCTCTCCAGTTGAATCACACTTGGGAGAGTCTACCTCTGAATCCAGCATAGCTGTTGAAGGGTAG 465 0.4839 MRGNSADMARHVMCPSPNRRVSISFFRVRPDSNQCLSPVPTMTTAMSLWQPGITGPYTLSNGALSGYEAMDMMPNWGMFGAPIVMLPPMRPVAVNSRKVPRGGTGVFLPWKGTSRKHTRHLPPRAQKGRLMELPSPVESHLGESTSESSIAVEG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02870 154 MobiDBLite consensus disorder prediction 139 154 - -
Vimu6g02870 154 MobiDBLite consensus disorder prediction 105 154 - -
Vimu6g02870 154 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 136 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02870 Vimu-Chr6 25359813 25360277 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02870 K10767 - gmx:100796344 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02870 6 25359813 25360277 Vimu6g02870 6 25359813 25360277 ECH
Vimu6g02870 6 25359813 25360277 Vimu3g01683 3 30923689 30928581 PCT