Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02842 ATGCAGGTTTCTTCATTTGTTTTTTTATTTGAATTATGTTTGCTTGGCAGTCAAAGGATTCTCACCATGTCAGTGGCACCGGTTGAAAGTATTCCCGCATTAAGCAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCCAGTGCAGCATGTACTTGTGCAACGTTGTGTTCCATCTCTAAAGAAGAGAGTTTATGGGAGAACGTATGTTCATCTATGTGGCCTTCAACCAATAGAGAAGATGTAAAAAATTTGATATCTTCTATCGGTGGATTCCGGAAATTTTATGCAGACTGTTTCCCGATTGTTGTAAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCATGAGTACCCGGACAATTGGACCGAAGCTGAGTATTATGGAGACATGAATGAATCGGAAAACGTCTGTCCATCAGATTTTGTTTCTATAATAGATATTAGGTTCAAGGGAAAACCGGTGTGTTCCAAAGTTCTTTGGGGAATCCCAAATGCAAATAGCTATGATGGGTGGTTCTATAACTGCCCTTTCCGGATTGATTTTCTCACTTATGCAGATAGAGATGATAACGATGATGGATGTGTTCATCTTTCAGTATCTGATGGTCTGCCACGTGTTACATCGATGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCGGGAGCTCTGCGAAGGGCTCCAGCTCAGTTGGATTATAGTAAACAAGAAAATGAAACAAGCTGCAAATCTTGCTAGCTGGAGCCCTCTTGGTGGACAACGACACTGGCCAACAGATAGGGATTTTGTCATCCGCTTTGGATCAGTTCTGCCTGCCAAGGACATTGTTCCTTGTCAAGTAGTGGAGTGTATTCTAATTATGAAGTTTAGAGTGGTTCATACCGAAGAAGAAGAAGAAGAAGAAGGGGTCCAAACAACCGTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCT 984 0.4207 MQVSSFVFLFELCLLGSQRILTMSVAPVESIPALSSDLFYDIFRRLDGATLASAACTCATLCSISKEESLWENVCSSMWPSTNREDVKNLISSIGGFRKFYADCFPIVVNKEVVEYQPNNYHEYPDNWTEAEYYGDMNESENVCPSDFVSIIDIRFKGKPVCSKVLWGIPNANSYDGWFYNCPFRIDFLTYADRDDNDDGCVHLSVSDGLPRVTSMERERKDGKLWRELCEGLQLSWIIVNKKMKQAANLASWSPLGGQRHWPTDRDFVIRFGSVLPAKDIVPCQVVECILIMKFRVVHTEEEEEEEGVQTTVKLTELSMQLEDMEGA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02842 328 SUPERFAMILY F-box domain 28 101 IPR036047 GO:0005515
Vimu6g02842 328 PANTHER F-BOX PROTEIN-RELATED 28 328 IPR045283 -
Vimu6g02842 328 Gene3D - 21 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02842 Vimu-Chr6 25130338 25133480 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02842 - - gmx:100779902 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02842 6 25130338 25133480 Vimu6g02842 6 25130338 25133480 ECH
Vimu6g02842 6 25130338 25133480 Vimu3g02080 3 35683069 35685712 PCT