Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02840 ATGGGTGTAGCAACAAAATGTGTAATAATTGGTATTGGTTTGTTGTGGCTGTTGAGTGTTGCTGAGAGTGTTCCCAACACGAGCATCATCAACGTTCTCTGCAACAATGGTGTGTACACCTCAGGGGACTTAGAGAAGGAAACAGCAACGAAAAAGAATTATGAGTACCACAACATTTCACCATACCCTAATGCCTATGCCTATGGGCATGCTACTTGTAACATTAATCTCACATCCTCTGATTGTAAAACATGTCTTGGTGCTGCTAAAATGGCCTTGTTTACCACATGCCAGGCACCACGGATAGGGGCTCGTTCAGTGCTCCATGATTGTACAATCAGGTACGAGCAATACCCATTTGACGATTAG 369 0.4363 MGVATKCVIIGIGLLWLLSVAESVPNTSIINVLCNNGVYTSGDLEKETATKKNYEYHNISPYPNAYAYGHATCNINLTSSDCKTCLGAAKMALFTTCQAPRIGARSVLHDCTIRYEQYPFDD 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02840 122 Gene3D - 26 120 IPR038408 -
Vimu6g02840 122 ProSiteProfiles Gnk2-homologous domain profile. 15 120 IPR002902 -
Vimu6g02840 122 Pfam Salt stress response/antifungal 50 118 IPR002902 -
Vimu6g02840 122 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 43 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02840 Vimu-Chr6 25106697 25107101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02840 68 120 Receptor kinase-like Gene Family AT4G23140 45.455 4.31e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02840 - - gmx:102663458 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02840 6 25106697 25107101 Vimu6g02840 6 25106697 25107101 ECH
Vimu6g02840 6 25106697 25107101 Vimu3g01648 3 30584656 30585057 PCT