Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02839 ATGGAATCAACTCACGTAATAGCCATTACAAATAGAGAAGAAGATAATTTCCCACATAAAACCAAAGAAAACAAAACATTCAAATTTGGGAAAAATGAAGTCCACTGTGTTTCCATTGCTTTCAGTGCCAGACACAAGCAGATGCAGAGAGACCAAGACACCAGGAAGATGATTCACTGCATCAAAGTAGGAATCTCCTTGGTTTTGGTTTCACTTCTGTACCTCTTGAACCCTGTCTTTAAGCAACTTGGTGAAAATGCAATGTGGGCTATCATGACAGTTGTCGTCATGTTTGAATTCTCTGCAGGGGCCACACTAGGAAAGGGCTTCAACCGTGGACTGGGAACTATTGTAGGAGGAGGACTAGGTTGCTTAGCAGCACTTTTTGCACAAAGCATTGGGATTGGCAGGGTTGGCAACTACATCATAATCGCTGCTTCTGTATTTATATTGGGATCGTTTGCCACATATCTTCGACTGATTCCAAGCATAAAGAAAAGATACGATTATGGAGTGATGATATTCTTGCTGACTTTCAATCTAGTTGTGGTTTCTGTCACACGCGTGAATGTGAAAGTGTGGGAATTAGCCGGTGAACGTCTCTTGAATATACTGATGGGCCTCATTGTATGCGTCTGTGTTAACTTGCTCGTCTTTCCTTTGTGGGCAAGTGATGAACTTCACGATTCCATCGTCTCCAGATTCCTTGACCTTGCCAATACAATTCAAGGCGAATGTACCAAAATGATTAACGAAAAGGAAAATCAACCCTGTGCTAGCTTCAACGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAGTTTCGCAAACTGGGAACCCTGGCATGGAAAATTTGGATTTTCCTACCCTTGGGAAAGGTACTTAAAGATTGGGGAGATTCTTCGCGAACTGGCTGCATTTATTCTAGCAATGCGTCGTTGCCTCGAAGCATCAAAAGAGCCCATGGCCACATTGAGAGAATCACAATGGGTATATTTAGAAACATGCGAAGCACTTGAGTCAAAGGTTGCGTGCGTTCTGCAAGAACTTGGAGACAGCATGAAGCAAATGATGAAATGTAATGCAAAGGGTTGTGTTTCGGAGCAGTTGAAAGCCGCCAGAGAAGATTTAAGCTTCATAATTTCCACGTGCAAAATGGCACAACTTGAGGATGATCAAGTGCTAGCCATTGCTAGCTTCGTCTTCTTGCACATGGAAGTGATACAGAAAGTTGAGGAACTGGTGAAAGAGGTGGAAGAACTTGGAGAAATCGCAGGTTTTCGCACCCCAATAAGTGCATTGTCTTCGTAG 1326 0.4291 MESTHVIAITNREEDNFPHKTKENKTFKFGKNEVHCVSIAFSARHKQMQRDQDTRKMIHCIKVGISLVLVSLLYLLNPVFKQLGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIVGGGLGCLAALFAQSIGIGRVGNYIIIAASVFILGSFATYLRLIPSIKKRYDYGVMIFLLTFNLVVVSVTRVNVKVWELAGERLLNILMGLIVCVCVNLLVFPLWASDELHDSIVSRFLDLANTIQGECTKMINEKENQPCASFNVCKSVLNSKSKDESLASFANWEPWHGKFGFSYPWERYLKIGEILRELAAFILAMRRCLEASKEPMATLRESQWVYLETCEALESKVACVLQELGDSMKQMMKCNAKGCVSEQLKAAREDLSFIISTCKMAQLEDDQVLAIASFVFLHMEVIQKVEELVKEVEELGEIAGFRTPISALSS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02839 441 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 35 435 - -
Vimu6g02839 441 Pfam Aluminium activated malate transporter 52 426 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02839 Vimu-Chr6 25103633 25105860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02839 52 388 Miscellaneous Gene Families AT5G46600 41.261 3.10e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02839 K25841 - gmx:100779890 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02839 6 25103633 25105860 Vimu6g02839 6 25103633 25105860 ECH
Vimu6g02839 6 25103633 25105860 Vimu3g01646 3 30575525 30578797 PCT