Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02818 ATGACACAAACAACAACAACAAGAAACAACAAATCCGCCATGGATCGAACCAGAGGAAGATCGTCCTCTATGTCTTCAAACGCTTTCCCCAGACGCCGTCATCCTAATATCCCCCTCCGACCCACTTCTCAGGAGATGCAGGAGATGAGGTTAAAGGATAATAATGACGATGATGATAATAATAGTAAGAGGGAATGGACGAAGAAGAGGAGAGGGAGCAACTCTCACAGCACCGAGGAAGAGAGTGTGGGGAATGAACAAGACGCGCGGTTGCATTCTAATAATACGGCGTCGTCCGCATCTGATCATAACCACCGGGGGCGGAACGTAATCGACGAAGTGATGATCGGAGCTATAGTGCCCAGGAGGACTCGTTCAGCTTCTGTGAAAAGACCCCATCACAGTTGGGTTGAGGAGCAGAGTGCTGAAGATGCGTCGCCTTCATCTTCCAATGTTTCTCTTCCCAAGAAGATGAAAGCGATTGGACCGTCTTCGTCGAATCAGGAGGACATCGAGATTGAGATAGCTGAGCTTCTGTACAGTTTGCGAGCTTCCCAAAACCATGATTATTCTTCTTCGCAGAAGGATAAAGCGAGTGATTCCCGTGCACTTTCGTCTTCCCCTGCCATTGATGTTGTTGAGACGAAGAAAGTGGAAGATTACAGTTCTTCTTTTTGCATTTTACCGCCGAACAATTCAACTCCCGAGTCAGTCGTAATTGAAAGCCATCAACCTGCGAAAATGGAGATACCATCGTCCGTGTCGCCTAGGACGTCTGGAGGTGATGGTATTGAGTCTTCCCAGGGTCCAAAACAAGACGCGGAGGAAGATAGTTTGAGTCCAGGTTGTGGATGTGGGGATGCTGTAGATGGAAAATTAGAATCCAAGTTGGTTGTCGACAAACATGATTGTGCTTCTACTATAAGCACATGCGATGATGTTCTGGAGGGCAATGGCAAACCCAAGTTTGAGATTGATCTAATGGCTCCCCCTCCTGTGACCTTCTCATCAGAATGGGGTAATTTGTCTAGGGGTGAAGACAGGAATAAGGTTGAAGACAAGGTAGAAAGTTTGAGTAAGAAGGAGAAAACACTGGGAGAAATTGAAAAGGTGAAAATGAAAGTTGATTTGGAGAAGCCAAATGGGCATCATGACCTAGCGACAAACCATGAATTAGGAGAGCTGGGCAGGAATAGGGAACAACCAACTACTACCGCTACAAATGCCAAACTGGAGAAAACTGCTCAATGTAGTTCAATGTCTTTGTCAGTGGATGTATCCGAAAGGCCAAGTGGTTTCTCTCCCCTTGGTTACGTGCCGCCCATGGGGACAGCTATGAAGACAGATAAAACAACAGGATTATTGACAGCCCCTCAACATGGGAACTTTGTGTTGTCTCAACCTCGACCAAAGAGATGTGCAAGTCACGGTTACATTGCTCGGAACATCTTCATGCACCAACAGTGTACAAAGATGAATACCCTTTTGACGTCCACAATCGGCTCTGGTTCTATGTGTGACGCAAAGCTCAGCAAAGTCCATTCTGCTGAAAGTGTAGTTGTTGGGAAGCAGTTTCATAAACAGTCACCAGGCGTCAGCCATAGTTCCGCACCGGAGAAGGGATGGACTACCACTAGTGATTTTAGTGTTGCTGCTATTAAAAAAAGTTCTGGTCCTGCCAACCCAGTGGATATGACGCAAATGAAGCAGCTTATGCTTCAGCAAGGTCAACATCCAGGGTCTTCTGCTAATATAGTGCATGGTCCTGCTTTTCTAATCCCTCCTGGCCAGCATCAAGCATCTGTAATACCAGGTACTAGTCCAGCTGGTGGTGTGAACAACGCTAGCAATGCTTCCTTGTCTAATAAATTCCAAAGTTCCCCAGGTGTATCTGTTGGTGGCGCAACACTGCCAGCAGTTGCTGCTACAATGAGCTTTAGCTACTCAAATTTGACAGCCAATGATGCTCCATATATGACAATAGTTCCGAATGGTGGGTATCCATTCCCCTTTTCAACTCCCCTTGGACCATCTGCAGCTATCAGAGGTGCAAGCCCTGCACAGTCAACACCTATTCTCAATGGGCCTTTGTACTCTTCTCAGATCTTCCACCCACTTCAGTATCCACAACAGCATCCTCACTCCCAACCACTCGTTCAACCTAGTAGTTATCTTAATGGAAGCACATCTAGTGTTTCATCATCATCCCATAAGCAGTCACAGGGAATGCAAGGTAACGACAACCATATTTTGTCCTCCACAACTATGCAACTTCAGCAGTCACAAAAGCAGCACACCTCACAGTCTCATCTTCGAAAGCATGAGACTGGGATAGCTGGAGATAATTCTCCATTTGCTGCAAGTGGAACAGCTTACTCCCAAAAGAATGGATTTGGGCAAAACTTCCCTATTCCAGTTCAGCCACTGGGCCTTTCTTTAACGCCATCTACAACATCAGATAGTGTTGGTGGCAACAGTGGAAATTTTGGTGACAAGCAGCAACAGACTTTGATGGGGGGTCTTGAGCATATTCCATCTCAACCACATGCAATCTCATTTGCTGCATATAATGGGACAAGTGTTCCTTCAAATCTGAACTTCTCAACCATGGCACAAAACCCTGTAATATTTCAGAGCCTGCCTGATATTGCATGGCAAGGATATCATGCTGGAAGTGCATCTCATGCAACTCAACAAAAGATGTATCCCATTATAGAAGGCAACAGTGGCGATAGTTCTTCCCACCGTGATGATGAAAAAGCCACTTCCGGGAAGCCATCGACCAACGGACCAACAACCCTTGTTTTTGATAATTCAGCAAAGAATCTTAACTTAGTTTCATCTCCCATGAATGGAAACTGGCCTAGTCGTTCCATTTCGTCAACTGCTACAACCACAAGTTTGCCTCTTTCTAGCAATGCTGTAAAGTCTCAACAGCCATCTCAGCTACTTCATCTTCAACAGCAGCATGGAATGTTACAGCCGCAACCTGCTGTGGCGACTCGTTATAAAACCTCGTCAACTAATGCTACAATTGGTGCAAATTTTTTTACTACCCCAGTTTATTCACAAACTCAAACTCAGAACAAAAGTTCGATTAAAGGCTCCCAGTCAAAAATCTGTGTATCAGCCCCAGATTCTCTTGTACATAACCCGTGTATCATAACTTCTACTGCACCAACTCTCCAAAGTTTTTCCCAGGATCAAGGAAGAGTATTGCAGGGTCAGACCCAAATATCTTTTGGTGGAAATTACATATCGTCCATGCCACTCCAAGGGCAACAACTATTCAATAACAACCAGTCTCTTGGTAATACAGTTGCAGGAGTTCCACCTAGTGGAGCCAACTTGAAGACAAATTCCCAGGGGAGCAAGGTTAGTTCATCAGTGAACTCTTCGCAGATGCAACAAACTGAGAATTCTTCCACTGCGACTGGCCAAAAATCTTCCCCAGTTTGTGGGAGAAATGTCCCATCCATCTTGAGCTCGGGCCCCAGTCACCTATCAGAGCTGAAGTATTAG 3522 0.4557 MTQTTTTRNNKSAMDRTRGRSSSMSSNAFPRRRHPNIPLRPTSQEMQEMRLKDNNDDDDNNSKREWTKKRRGSNSHSTEEESVGNEQDARLHSNNTASSASDHNHRGRNVIDEVMIGAIVPRRTRSASVKRPHHSWVEEQSAEDASPSSSNVSLPKKMKAIGPSSSNQEDIEIEIAELLYSLRASQNHDYSSSQKDKASDSRALSSSPAIDVVETKKVEDYSSSFCILPPNNSTPESVVIESHQPAKMEIPSSVSPRTSGGDGIESSQGPKQDAEEDSLSPGCGCGDAVDGKLESKLVVDKHDCASTISTCDDVLEGNGKPKFEIDLMAPPPVTFSSEWGNLSRGEDRNKVEDKVESLSKKEKTLGEIEKVKMKVDLEKPNGHHDLATNHELGELGRNREQPTTTATNAKLEKTAQCSSMSLSVDVSERPSGFSPLGYVPPMGTAMKTDKTTGLLTAPQHGNFVLSQPRPKRCASHGYIARNIFMHQQCTKMNTLLTSTIGSGSMCDAKLSKVHSAESVVVGKQFHKQSPGVSHSSAPEKGWTTTSDFSVAAIKKSSGPANPVDMTQMKQLMLQQGQHPGSSANIVHGPAFLIPPGQHQASVIPGTSPAGGVNNASNASLSNKFQSSPGVSVGGATLPAVAATMSFSYSNLTANDAPYMTIVPNGGYPFPFSTPLGPSAAIRGASPAQSTPILNGPLYSSQIFHPLQYPQQHPHSQPLVQPSSYLNGSTSSVSSSSHKQSQGMQGNDNHILSSTTMQLQQSQKQHTSQSHLRKHETGIAGDNSPFAASGTAYSQKNGFGQNFPIPVQPLGLSLTPSTTSDSVGGNSGNFGDKQQQTLMGGLEHIPSQPHAISFAAYNGTSVPSNLNFSTMAQNPVIFQSLPDIAWQGYHAGSASHATQQKMYPIIEGNSGDSSSHRDDEKATSGKPSTNGPTTLVFDNSAKNLNLVSSPMNGNWPSRSISSTATTTSLPLSSNAVKSQQPSQLLHLQQQHGMLQPQPAVATRYKTSSTNATIGANFFTTPVYSQTQTQNKSSIKGSQSKICVSAPDSLVHNPCIITSTAPTLQSFSQDQGRVLQGQTQISFGGNYISSMPLQGQQLFNNNQSLGNTVAGVPPSGANLKTNSQGSKVSSSVNSSQMQQTENSSTATGQKSSPVCGRNVPSILSSGPSHLSELKY 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 904 936 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 248 266 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 124 167 - -
Vimu6g02818 1173 PANTHER PROTEIN TIME FOR COFFEE 14 235 IPR039317 GO:0042752
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 708 792 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 244 282 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 141 167 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 46 87 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 1111 1166 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 810 833 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 1111 1173 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 1 112 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 88 104 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 809 833 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 708 766 - -
Vimu6g02818 1173 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02818 Vimu-Chr6 24843842 24848847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02818 - - vra:106757719 2159.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02818 6 24843842 24848847 Vimu6g02818 6 24843842 24848847 ECH
Vimu6g02818 6 24843842 24848847 Vimu3g01625 3 30266326 30271798 PCT