Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01625 ATGGATAGAACCAGAGAATCCAGAAGACCATCCATGGCCTCCTCCACCAGACGCAGACATCGAACTATTGCTCTCAGAGACTCTTCTGAGGAAGGAGCTGTGGAGTTGAGGGAAGGTGTCAATAAGAGAGGAAGGAATCGAGATAGGGACAGGGATTCGGTGAACAGGAGCAAGAGGAGGAGAGGCTCTCACTCCCAAAGCACCGAAGAGAGCGTTGGTAACGAACAAGACGAGGATGTTATAGACGTTGGCGTTTCTAAGATCCGTTCTCCTAATAATCCGACGTCGTTTTCGTCTGATCAGAACCATCGTCGGCTCTTCACGCCATCGAAACCGCCTCCGTTTAAAATAACGGAGGAGATGATCGGCGTGACTGTTCCCAGGAAGGCTCGTTCAGCTTCTGCGAAAAGGTCTCATGAAAGTCTGGTCTCGGCAAGTAGCGGCGGCGGGGAGGAGCAGAATTGCCGGCAACGGTCGGATTCCCCCGGAGGAATGAGTGTTGAAGCGGCCTCGCCTTCTTCTTCGAACGTTTCTCTTAGGAAGAAGATGAAAGAGATTGAAGTTGTTCCTAAGGCATCAACATCGTCTTCCTCAGACATCGAGATTGAGATAGCTGAGCTACTGTACGGTTTGAAGACTTCAAAGAACCACGAATCTTCTTCGGAAAAGCCTGAAGCAGGTGTCAATCACCGCAACGCCACTGTACCTTGCCCATCTAAGGATGTTGAGAAAAAGAAAATGGAAGATGACAACAATTATTCCACCGCGGTTTCGAATAATTCAAGTGAAGAGTTAGTCAGGATTCAGATTGAGCAACCTACTGATGTGGATTGTCACGATCGTCCATCATCAGAGGCCCCGATAGAGGGTATAGGGGAAGACAATATGAAATCTGGTTCTGGGTTTGGGGATGCTTCTGTGAATGGAAGATCGGTTTTCCCTTCAAAGAAATCGCCGTCGCACATCAAGTTGGATTCCGATAAACAAGAATGGGCTTCCAACAGAGTGATCTCGGCTGTTGTAGAGGGCAAAACCCAGCGAGTAGGCAAGTTTGAGATAGATCTGATGGCTCCTCCTCCTATGGCGCTTTCCCCGGAACGGGATGAATTGTCATCAGAAACTAAAGCTTTGGCACTGGATGCGGAAATGAATGGAAATAGTGTCAAGTTGGAAACACCGGTTAAGGAGGGGAGAACTCCGGAAGAAATTCAAAAGGCGAAAACGGTCGCATTTAACGAGAAGTTGGATGTGTTAAAACACGATTTGGAGAAGCCAAACGATGACGACAAGACAAAAAATAAATTAGACGAGAAGGATAGGAACAAGGAATTGCTTACCGTATCATCAAATCCCAAAGTAGAGAAAACCGTTCAATCTACTTCAATGCCTTTATCAACAGCTGAATCAGGACGGTCCAGCAGTCTCCCTCCCATTGGATACAAGCCGCTCTCGGAGCCAGTTGTGAAGACGGAGAAAACCATAAGGTCATTGACACAGCAGCATGTGAATTTTGTCCTCTCTCAAAGACAACCGAAGAGATGTGCAACACATTACTACATTGCTTGTAACATCTTACACCAACAATTTACAAAGATGAACCCCCCGTTGCCAGCAGCTACTGGCTCTGGTTCTCCGTGTGGCACAAAACCCAACAAAGTCAACTGTGTGTCCTCTGCAGAAAGTATGGCCGTTGGGAAGCAATCTCAAAAACACTTGGCAGTTGTAAACCAGAATTCTGCACAAGATAAAGGTTGGGCCGCCACCAGTAATGCCAGTGTTACCGCAGCCAAATGTTCTAATAATGCCAATCCAATGGATTCAACTCATAGGGTGCAGCTTGTGTTCCAGCATGGTCCCAATCCTGGGCCACCGGGCAATCTAGTGCATGGTCCTGCTTTCCTGTACCCTCCAGGGCAGCATCAAGCTTCAGTTACGGCAACTACTAATCAGGCAGGAGCTGTGAATTCCCCTAATAGCACTTCCTCGTATAATATATCCCATAGCTCAGTAGGCGGGTCTCTTGGTACCTCCTCAACTTTGCCAGTGGTAGCTCCTGCAATGAGCTTTAGCTACCCAAATTTTTCAGCCAATGGTTCCTCTCCGTATATGACAATAGTTCACAATAATGGGTATTCATTTCCTTTCTCAACTTCTATTGGAGCAGCTGCGACAATCAGAGGTGCAAGTCCTCCGCAAGCGACACATGTAATCAGTGGGCCTTTCTACTCTTCTCAAACGTTCCATCCACTTCAGCATCCTCAGTCACAAGCACTGGTACAACCAAGTTATCTTAATGCAAGCACATCAAGCAGTTCATCATCTCATAAACAGCCACAAGTTAATGGCAGTAATATTTTGACCTCTACAACTATGGAGCAGCAGTCACAAAAGCGACAGACCTCACTCTCTCATCTACGCAAGCATGAGACTGAGACAGGTGGAGGTAATGCACATTCTGTTGCTACTCGAACATCTTTCCCTCAGAAGACTGTGCATGGCCAGAACTTTACAATTCCAGTTCAGCCAGTGAACTATTCTTTTAAGCCATCTGCAGCATCAGACATTGTTGTTGGCAATAGTGGAAGTTTTGGTGACAAACAACAGCAGCAGCAGGCTTTAAAAGGAGGGGTGGAGAATATACCATCTCAAGCATTTGCAATATCATTTGCTGCATTTAATGGGACCAATGTTCCTTCAAACCTTAACTTCTCATCCGTGGCACAGAATCCTGTGATACTTCATAGTGTGCCGGATATAGCATGGCAAGGGTATCAAGCTGCAACCTCAACTCAGACTACTCAACAGATGAATTATTCAATTACTGAAACGAAGAGTGGAGGAAATTCTTCGCACCAAGAAGATGAAAAGAAAATTGCAAATGCTAAGTCTTCAAGCAACGGACCAACCACCCTTGTTTTTGATAATTCATCCAAGAATCTTAACTTCATGCTATCCACTGGAAACTGGTCTAGTCAACCTGTTGCTTCAACTTCAATAACAAGCGTGCCTCTTTCAAGTAATGCTTCAAATTCTCAACAGCCACAGCATTCGCTTCAGCTTTCAAAGCAGCATGTTGGGCAACAGCAGCAACCCACTCCGGCAAATCGATACAAAGCATCATCCACTAATAGCACCCCTGGTCCTGCTACAAAATTTGCAAACAATGCCCCTGTTTTCTCACAAACTCTTACTCAATGCAAAAGTTCTAGCCAAGCTTCTCACGCTAAGGCCTCGGGTAGAACTTCAGATTCTCATGCTCATCACTCATCTATCATGACACCCAATGCTCCAACCTTCAAGAGTTTTTCTCAGGAACAAGGGAGAATTTTGTCCGGTCATATGCAAATTTCTTTTGGTGGAAATTACATAACTTCCCTGCCACCCCAAGGGCAACAAGTACTCAGTGGCAACCAGCCTATGTGTACACCACCTCAAGGAAATATTAAGTCAAATTCGGAAGGAAGTAAAGTTGGTTCGTCAGTCAACGCTTCACAATTTCAACAAGCTGAAAATTCTGCTGGGAGTGGTCAAAAATCTTCTCCAGTTTGTGGGAGAAATGTCCCATCAATATTAAGCTCATGCACCAGCCACCTATCAGAGCTAAAATATTAA 3612 0.4563 MDRTRESRRPSMASSTRRRHRTIALRDSSEEGAVELREGVNKRGRNRDRDRDSVNRSKRRRGSHSQSTEESVGNEQDEDVIDVGVSKIRSPNNPTSFSSDQNHRRLFTPSKPPPFKITEEMIGVTVPRKARSASAKRSHESLVSASSGGGEEQNCRQRSDSPGGMSVEAASPSSSNVSLRKKMKEIEVVPKASTSSSSDIEIEIAELLYGLKTSKNHESSSEKPEAGVNHRNATVPCPSKDVEKKKMEDDNNYSTAVSNNSSEELVRIQIEQPTDVDCHDRPSSEAPIEGIGEDNMKSGSGFGDASVNGRSVFPSKKSPSHIKLDSDKQEWASNRVISAVVEGKTQRVGKFEIDLMAPPPMALSPERDELSSETKALALDAEMNGNSVKLETPVKEGRTPEEIQKAKTVAFNEKLDVLKHDLEKPNDDDKTKNKLDEKDRNKELLTVSSNPKVEKTVQSTSMPLSTAESGRSSSLPPIGYKPLSEPVVKTEKTIRSLTQQHVNFVLSQRQPKRCATHYYIACNILHQQFTKMNPPLPAATGSGSPCGTKPNKVNCVSSAESMAVGKQSQKHLAVVNQNSAQDKGWAATSNASVTAAKCSNNANPMDSTHRVQLVFQHGPNPGPPGNLVHGPAFLYPPGQHQASVTATTNQAGAVNSPNSTSSYNISHSSVGGSLGTSSTLPVVAPAMSFSYPNFSANGSSPYMTIVHNNGYSFPFSTSIGAAATIRGASPPQATHVISGPFYSSQTFHPLQHPQSQALVQPSYLNASTSSSSSSHKQPQVNGSNILTSTTMEQQSQKRQTSLSHLRKHETETGGGNAHSVATRTSFPQKTVHGQNFTIPVQPVNYSFKPSAASDIVVGNSGSFGDKQQQQQALKGGVENIPSQAFAISFAAFNGTNVPSNLNFSSVAQNPVILHSVPDIAWQGYQAATSTQTTQQMNYSITETKSGGNSSHQEDEKKIANAKSSSNGPTTLVFDNSSKNLNFMLSTGNWSSQPVASTSITSVPLSSNASNSQQPQHSLQLSKQHVGQQQQPTPANRYKASSTNSTPGPATKFANNAPVFSQTLTQCKSSSQASHAKASGRTSDSHAHHSSIMTPNAPTFKSFSQEQGRILSGHMQISFGGNYITSLPPQGQQVLSGNQPMCTPPQGNIKSNSEGSKVGSSVNASQFQQAENSAGSGQKSSPVCGRNVPSILSSCTSHLSELKY 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 1001 1105 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 1 180 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 88 106 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 214 329 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 420 479 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 941 972 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 237 251 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 273 287 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 252 268 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 301 315 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 789 821 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 1133 1186 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 446 473 - -
Vimu3g01625 1203 PANTHER PROTEIN TIME FOR COFFEE 293 1195 IPR039317 GO:0042752
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 20 66 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 137 179 - -
Vimu3g01625 1203 MobiDBLite consensus disorder prediction 420 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01625 Vimu-Chr3 30266326 30271798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01625 - - gmx:100784698 1726.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01625 3 30266326 30271798 Vimu3g01625 3 30266326 30271798 ECH
Vimu6g02818 6 24843842 24848847 Vimu3g01625 3 30266326 30271798 PCT