Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02798 ATGCTGCTGAGGAACAGATCAAGAGCAGTGAGCAAGCCAGGTTTGATGGCTGATCATAGCTCTCAGCAATCACCCAGTCAAAACTATGCTAAAACTATACCCTCTCTATTTGGGTCACCAAAATTCAGAGATTTCACCAACAAGTGTCTCTCTTCTGGAACCGAGGCCTTAAGGAGCCCAACTTCGATTCTTGATGCCAGAGCATTATCCCCTTTTGTTTTTGGAAATCCATTCTCAACTCCTCCAAACAAAATCTCCCCACCAAGCAGAACTTCCTGGGACAAGCCTGATTCAAAGGGTCTTGGTCTTGCTCTTGTTGGTGCTTTCAAAGATGACGATAACCCGATTCGTGACCATTCTGAGACCAACAAAGGAAACGTTCTGCTTAGAGTGAAAATCCCATTTGAATCTCAGACGTGCGCTGATGATTTTGGAACCAAAACTAAGGATTCAAAAAACTCATCAGGGTCAGGAAGTTTTGCAAAGGATGATTATGCTTCGTCATGTGTGAGGGCTCTGTCTTGGAGTGAGATGGAGCTTTCTGAGGAATATACATGCGTGATATCCCATGGACCTAACCCAAAAACCACACACATATTCAATAATTGCATTGTGGTGGAGACCTATTATTCTCTCCCCCAAAACCAAAACTCTCATTCTGCTGCCTCCGCAAATTTCCTCAGCTTCTGTCACACTTGCAAGAAACATCTAGACCAGACCAAGGACATCTTTATTTATAGAGGAGAGAAAGCTTTCTGTAGCAGGGAGTGCCGCCACCAAGAAATGGTGCTGGATGGAATAGAAAATTTAGAGTTTGAAAGCAATGGCTTTTCTTGA 837 0.4361 MLLRNRSRAVSKPGLMADHSSQQSPSQNYAKTIPSLFGSPKFRDFTNKCLSSGTEALRSPTSILDARALSPFVFGNPFSTPPNKISPPSRTSWDKPDSKGLGLALVGAFKDDDNPIRDHSETNKGNVLLRVKIPFESQTCADDFGTKTKDSKNSSGSGSFAKDDYASSCVRALSWSEMELSEEYTCVISHGPNPKTTHIFNNCIVVETYYSLPQNQNSHSAASANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIENLEFESNGFS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02798 278 ProSiteProfiles Zinc finger FLZ-type profile. 225 269 IPR007650 -
Vimu6g02798 278 MobiDBLite consensus disorder prediction 78 93 - -
Vimu6g02798 278 MobiDBLite consensus disorder prediction 1 28 - -
Vimu6g02798 278 MobiDBLite consensus disorder prediction 78 97 - -
Vimu6g02798 278 PANTHER FCS-LIKE ZINC FINGER 8 3 269 IPR044593 -
Vimu6g02798 278 Pfam zinc-finger of the FCS-type, C2-C2 217 265 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02798 Vimu-Chr6 24579433 24580522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02798 - - gmx:100788456 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02798 6 24579433 24580522 Vimu6g02798 6 24579433 24580522 ECH
Vimu6g02798 6 24579433 24580522 Vimu3g01610 3 30065971 30066882 PCT