Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01610 CTTATGCTGCTCAGAAACAGATCAAGAGCTGTCACCAAACCAGGTTTGATGGGTGATCACAGCTCCCAGCCAAGTCCAAATCAGAGTTACAGAAGAACCATCCCTTCTTTGTTTTCACCAAAATTCCGTCACTTCTCAATCAAGTGTCTCTCAGGAGCTGAGGCTTTGAGAAGCCCCACCTCCATTCTTGACACCAGAGCCTTAACCCCATTTGGGACTCCTTTCTCACATGAGAACAAGATCGAGACTTTTGCCTCACCAAGAGTACCCTCTGAAAACAGAACTTCATGGGACTCAAAAGCCATTGGTCTTGCTCTTGTTGGTGCACTTAAAGATGAACCTCTTCTTCACAACGCAGCTAAACCATGTACTGGAACTGTTCTCTTTGGAACTAAGCATAGGGTGAAAATCCCTCCACTGTCACTGCCACCTTCATCTTCTGAATCAACTAAAACATGTGCCGTTGCTGGTTTTACTGCCAAAACCAAGGATTCGCAAAAGCAAACAAAGGATTCTCCATTATCGGTTGCAACAGGTGTTATGAGTTTGAGTGAGATGGAACTTTTTGAAGAGTACACGTGTGTGATATCTCATGGACCTAATCCTAGAACAACACATATATTCGACAATTGTATCGTGGAAAGTTACTGTTCCCTCCCCAATAACACTCTCTCACCTTCACTCAATTTTCTTAGCTTTTGTCACACTTGCAAGAAGCATCTTCAGCAGACAAATGACATTTTTATTTACAGAGGAGAGAAAGCTTTCTGCAGCAAAGAATGTCGTCAGGAAGAAATGGTACAAGATGGAGCAGAAATTTCAGAATTTGACTAA 834 0.4269 LMLLRNRSRAVTKPGLMGDHSSQPSPNQSYRRTIPSLFSPKFRHFSIKCLSGAEALRSPTSILDTRALTPFGTPFSHENKIETFASPRVPSENRTSWDSKAIGLALVGALKDEPLLHNAAKPCTGTVLFGTKHRVKIPPLSLPPSSSESTKTCAVAGFTAKTKDSQKQTKDSPLSVATGVMSLSEMELFEEYTCVISHGPNPRTTHIFDNCIVESYCSLPNNTLSPSLNFLSFCHTCKKHLQQTNDIFIYRGEKAFCSKECRQEEMVQDGAEISEFD 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01610 277 MobiDBLite consensus disorder prediction 18 32 - -
Vimu3g01610 277 Pfam zinc-finger of the FCS-type, C2-C2 226 270 IPR007650 -
Vimu3g01610 277 PANTHER FCS-LIKE ZINC FINGER 8 4 272 IPR044593 -
Vimu3g01610 277 ProSiteProfiles Zinc finger FLZ-type profile. 229 273 IPR007650 -
Vimu3g01610 277 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01610 Vimu-Chr3 30065971 30066882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01610 - - gmx:100811607 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01610 3 30065971 30066882 Vimu3g01610 3 30065971 30066882 ECH
Vimu6g02798 6 24579433 24580522 Vimu3g01610 3 30065971 30066882 PCT