Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02732 ATGGTCACTGTGGTGGGGTTGGCATGGGCACGGTCACGAGTGAGTGCTGTCAATGGTGATAATTATTTGGGTGCTTCTCCCTCTTCAAATCATTTTGGAAATATTGATGCTCAGGACATTGTCGATGTCATAACCATTTTGGTAATTTGGGCATGGACTGGCTGTTTATGCTCACTATTAGTTGCATTTAGTATATTCAAATGGAAACAATCGGGTGCATCATCTCTGACAGCAGGTTTACTTCAGGAAGATCAGCTAGAGATTGAATTGTCTGATTATGGAAAGATTCCTAGTCCAGGCAGCGAGAGCCCTTCAGGGCTTCTTAATGGTGACAGCCTAAATGTAGAACCAATTTCTGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTATGGTGCATCATTATAAAATGGATTGTTGAGCTTCTAAGTCTAGGGTTCACCATATGTTTTTCAGGATTCTTTTTATTATATGTTGACTGGAATGGACTCCGTAATGCAAAGTGTGGGATGGATGCGGTTGAATCTGGGATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCGTCAACACCCCTTAACCCCACTAACAATTACCAAAGCTATTATTGTTGGATACTTGGGATTATTTTCTATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACTCTTGAAATCCGGCGATTTTACTACAATAGTCTCCATGTCACTGACAATGAGATTCAAACCATGCCATGGGCTACAATTCTTGAAAAAGTTGTTCTGCTACAAAGGTCTCAGCAACTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATTGTCATGCGGTTGATGCGGAAGGAAAACTACCTAATTGGAATGCTCAACAAGGGTGTGCTAGCTTTCCCTATTTCACAGTGGTTTCCAGGTGCTGGTCCTATAGTGACATCTGGTTCTAGTGGAACTCAGAATCGCTTAATACTAACCAAGACCCTCGAGTGGACTTTGAATTGGTGCATCCTGCAGAGCATGTTTGATCGAAGGGATTTTGTGTCAAATCCAAAGACATTACAAAGAAGGCTCATGGTTGTTGGGCTTGCAATGCTTTTACTCTCTCCATTTCTTGTCATATTCATGCTGGTGTATCTCTTTCTGAGACATGCTGAGCAATTTTACAATCACCCTAGCACTGCATCATCTCGAAGATGGTCAAATCTGTCTAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATAGCAGTGTATTGCACGCATCTGATTATCTCAAGCAATTTCCTGCACCAATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGCGGCTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTACTAGAGGGCCATATACTTGGTCGGAACTTGCTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCAATCACGAATGAGCTTCTGGTTTTAGATGCTGAAGGAGCTATGTCTATGGTGGTTCAACATACTCATTATCTGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAATCGGTCCGTGCTGAGTTTGCAACTTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACACCATACTTGCTTCTGTTTATTGTCCCAAAGCGGGTTGATGATATCTTGCAATTCATTGCTGATTTCACTGTAAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAACATGGAAACAGTCATTATGGTTCCCCTTGCAATGCACCTCGTAGCCGGAGGAGTTCTCAAGGGAAGATGGAGAAATCATTGCTGAGTATTATTATTTTTGTTGTGTTGAACTTCTCTTGCTATTACAGCTTTCAGAGTAGTTATCCATCATGGGAACCTAGCGCACAGGGTAAACAGTTTTTGATAAATCTTAGAAAATTCAGAGAGGAAAAGTTACCAGTTCAAGGAAACATACATGCAGCTTCCCCTCCTAGAATGTGGAGGGGTATTTCCAACACGGGTAGCAATATTGGAGACAGAAACAGGTTTATGTCCAGGGAAATGCCATACAGTACTTTTTTAACTGGCAATCACTTGGGTTCTCTGTGGTTGATTGAAGCCAATCAACACAATCATCCCTATCTCCTTGACTGGTACTATACATCTCGATCTTCTGACGTAAATCAAGTAGACGATCCTTCAGAAGCATTTGGAGTAATAGAGCATCATTCTAGAGAGCATTGGATTCCCTCCAATATGACACACAATGAAAGTGAATATGAGGAATACTCAAATGAGAATCGTCGAGGTTGGGCTCAATCTCATCTTGTGACTTCCACATCCGTACCCATTTTCAGGGAAAGCTTTATTCAGGATCAAAGTTCTAATGGACTGACCCATACTACCAGGAGTCATTGGTGGGCTAGACACGCGCAGCAGGGTGGACAGAATCAGACAAGCTTTTTTGAGCCTCCAGATTTCAATCAGGAAAGATATAATTATTATGATAAGTTTTCTGATAGAGGGTCAGAGGAAGAAGATCGTGAACACCGCTTGTACTCTAGAGATAGTCACAGATTATCTAGAACATACACAGATGACTTGGGGGCTGGGGAATTAAATCTTCATTTTGATGATATTTATAGCAAACCTCCAGAAACCCCACCTGCAAGCTTTTGA 2760 0.4149 MVTVVGLAWARSRVSAVNGDNYLGASPSSNHFGNIDAQDIVDVITILVIWAWTGCLCSLLVAFSIFKWKQSGASSLTAGLLQEDQLEIELSDYGKIPSPGSESPSGLLNGDSLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALRQHPLTPLTITKAIIVGYLGLFSIYWIFCFLRFFAQLKDTLEIRRFYYNSLHVTDNEIQTMPWATILEKVVLLQRSQQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPIVTSGSSGTQNRLILTKTLEWTLNWCILQSMFDRRDFVSNPKTLQRRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSVLHASDYLKQFPAPIISIIAKFISFVSGGFAAVLIIIAFLEESLLEGHILGRNLLWYAAVFGTITAISRAAITNELLVLDAEGAMSMVVQHTHYLPKRWRGKESTESVRAEFATLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILQFIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSIIIFVVLNFSCYYSFQSSYPSWEPSAQGKQFLINLRKFREEKLPVQGNIHAASPPRMWRGISNTGSNIGDRNRFMSREMPYSTFLTGNHLGSLWLIEANQHNHPYLLDWYYTSRSSDVNQVDDPSEAFGVIEHHSREHWIPSNMTHNESEYEEYSNENRRGWAQSHLVTSTSVPIFRESFIQDQSSNGLTHTTRSHWWARHAQQGGQNQTSFFEPPDFNQERYNYYDKFSDRGSEEEDREHRLYSRDSHRLSRTYTDDLGAGELNLHFDDIYSKPPETPPASF 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02732 919 PANTHER APG9 AUTOPHAGY 9 63 872 IPR007241 GO:0006914
Vimu6g02732 919 Pfam Autophagy protein ATG9 115 604 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02732 Vimu-Chr6 23857090 23863563 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02732 K17907 - gmx:100777405 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02732 6 23857090 23863563 Vimu6g02732 6 23857090 23863563 ECH
Vimu6g02732 6 23857090 23863563 Vimu3g01292 3 23028339 23037986 PCT