Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02714 ATGGCTAAACATTTTGGTGACTCTGTAAATATCGCAGCGGAGGATTTTTGGGGTTGCCGGCGAAGCAATTCGTTAATTCTCCATGGATATGGTGAGAAGAAAGAGGGTGAAGCCTCCCTGTCGTGGTTCGAAACCTCGGACTCTGTTTGTCGCCGACACCAGTTTGAACCCGATGGTCGACTCTCCGTTGTGATTGTTGGTGATTCCAGGCCCTTCTACCAAAGGGTGGTTGGAGCTTTCATGAATAAATTTTATCCCTCGGGATATCCATACAGTGTGAATGAAGGCTACCTTAGATACACACAGTTTCGAGCCCTGCAACATGTTACCAGGGCAGCGCTATCGGTGCTATCAACTCAGTCCTTACTATTTGCTGCAGGGTTGCGGCCCACTCCAGCACAAGCGACAGCTGTTAGTTGGATTTTGAAGGATGGAATGCAACATGTGGGGAAGGTGATCTGTAGCAATTGGGGTGCTAGAATGGATTCTGAGCCTAAACGTTGGAGACTGCTAGCTGATGTTCTCTATGATATAGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCACATCTTTTTCTTGAAGTGGCAGGCTTAGGAAATTTTGCAAAGGGGATAGCAGTTGTTGCAGCAAGAGCAACAAGGTTGCCCATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGCGACCTATTTGCTAAAGGAGAGGCTTTCTCAACTCTCTTTAGTGTTATAGGAATTGGAGTTGGAATTCAATTAGCATCTACTATCTGCGCATCAATGCAGGGAAAGTTGGTTGCGGGTCCTCTCCTTTCAATTATACATTTATACAGCGTGTCTGAAGAAATGAGAGCAATTCCTATCAATACCTTGAATCCACGAAGAACTGCAATGGTGGTGGATGATTTTCTCAAGGCAGGAGTTGTATCAAGCCCTTCTGATCTACGATATAGGGAAAATCTGCTGTTTAATCTGCAACTCAAAGAAGATACGGGAAATGTAAAAGTGGGGAAGGCTATGCACAAGACCATTAAGCCTTCCAGGCTTCTTGAATTGAAACAAGTGTTCAATGAGGAGAAGTTTCTTTTAAACTTAGGGAATAAAGGCGTTGACATGGTATTGGAGCAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAGTTGTGAGTTCCTCTCGTCATGAGCTCAGTGCTAGTGTCATGCACGAGGCTTATCATAAAATGAATGGTGTGTTTCCTATATTCTTGAAAGAATTACAGAACAAAGGGTGGCACACTGATCGGTTTTTGGATGGAACTGGGAGCCGTTTTGCATTATAA 1344 0.4427 MAKHFGDSVNIAAEDFWGCRRSNSLILHGYGEKKEGEASLSWFETSDSVCRRHQFEPDGRLSVVIVGDSRPFYQRVVGAFMNKFYPSGYPYSVNEGYLRYTQFRALQHVTRAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKVICSNWGARMDSEPKRWRLLADVLYDIGIGLEVLSPLCPHLFLEVAGLGNFAKGIAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFSVIGIGVGIQLASTICASMQGKLVAGPLLSIIHLYSVSEEMRAIPINTLNPRRTAMVVDDFLKAGVVSSPSDLRYRENLLFNLQLKEDTGNVKVGKAMHKTIKPSRLLELKQVFNEEKFLLNLGNKGVDMVLEQDASGEDALRGWLVAAYAAQVVSSSRHELSASVMHEAYHKMNGVFPIFLKELQNKGWHTDRFLDGTGSRFAL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02714 447 Pfam Vitamin B6 photo-protection and homoeostasis 75 306 IPR006968 -
Vimu6g02714 447 PANTHER RUS1 FAMILY PROTEIN C16ORF58 37 446 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02714 Vimu-Chr6 23719481 23722924 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02714 - - gmx:100804154 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02714 6 23719481 23722924 Vimu6g02714 6 23719481 23722924 ECH
Vimu6g02714 6 23719481 23722924 Vimu3g01316 3 23557359 23567098 PCT