Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02702 ATGCCACGACACGACCAAAGAGGACTTCTAGTTAAGTTGCATTCGAAGAAGGTAAACACTCCTCAGTTGAAGTCGTCGCTGCGAAGTGCATTCCTTCCTTCTCATCTTCCTGCTGCTGCCGCATTCAACGGTGCAGGAATGGCCAGATACCTAGGAGGATTACTAGCACTGCTTTTTTGTGCTTCGATCTGCGGATCCGTCACGATTCCTGGCCCCATCTCTGATGCTCACCGTTCCGTAGCATCGGAGCTCTTCAGTGGCTCATTTTCAAGTTTAGAAGAGGCCTATGAGGCTCTCAGAGTTTTTGAGATTCTTGGGATTGGGAATAAGCCAGATGTGAGCGCAACCACGTGCAAGCAAGTAGTGGAAAATCTTGGGTCCTCGTCCCCTGTGAAGGATTTGTTCTATGCATTAAAGGTTAATGGCATATTAAAGTGCAAGGTTAATGCGGACGTTTTCAAGGATATTGCTGTGAGAGTTAAAGCCACTGTCAATGATGCAAGCACTTTGGTTGACATGTACCATTCAATAGCAAGTTTGGTTCTCATAAAGGATCAGGCTTCTGATGTTGATGTGCTTCTTGCCGATGCGGATGGAATCTTCCATTCAATCAAGGCTCTGAGCCAAAGTGATGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCCAGTACCTTTGCCGCTGGGTTAGCACTGGAAGCACTGGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCTGTCTAGGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGAACCTTCTACTTTGATGAGAAATTTGTTGGTGGACGTGAGCATCAGGGTTCTCTTTCCACAACTTCATCTGTTGTTCGAGGGGTTACAACATTTGCTTCTGTAATTTCTGGAAAAGTAAATCTTCCAGGGCATAAAGTTTTGGGTTTAGCAAAATTTTTCCTGGGTATTGGAATCCCAGTAACATTATGTACCTTGGATTTCTTCTTGTGGTGTAGGGTTTCCATCCCATTGGTATTGTCACTTCCTGAAACAGTTTATTCATTATCCCAAAAAGATCAGCTCAAGGTTAGGGTGAATACAGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGATTGTCCGAGCTTTCCGCTCTGATGCTAAAGATTCAGCTATTTTTGAGAGCAAGGAGCTCCAATATGATGAAAGTAATGGAATTCATGTCTTGGAAGTTTTCCCAGACAATGTGGATGTGGGAACTTACGTGTTTGTTTTTGAGATTGTACTTCGCGATTCTGCTGGTGAAAATGTTTTTGCTACTGGAGGTCAAATTCATGTACCAATATATGTCACTGGCATTATCAAAGTCAGCAATGCAGAAATTGCAGTTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAAAGCTAGATTTGGATGGAAATGTTGTTGAACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAATTGACAACACCTCATGGTCATGCTTTTAAGCCTCATCAGGCACTTTTGAAGTTGAAGCATGAGACAAAACATGAACACGTCTTTGTGGTTGGAAATACTGGCAAGAAGTTTGAGATCGTTCTTGATTTTCTTGGTTTGGTGGAAAAGTTTTATTATCTCTCGGGCAGATATGACATTGAACTGACCGTTGGAGATGCTGTTATGGAGAACTCTTTCTTGCGACCTCTTGGTCACGTTGATTTAGAACTTCCAGAAACTCCTGAGAAGGCAGTGCGTCTTCCTCCCCTCCCTGTTGATCCTTACTCAAGATATGGTCCCAAAGCTGAGATAGCCCACATATTCAGGGCTCCTGAAAAACGACCACCCCAGAACCTCTCTCTTACTTTCTTGAGTTTGACTCTTCTTCCATTCATTGGCTTTTTAGTTGGGCTGTTACGCTTGGGGGTGAACTTTAAAAATTTTCCATCTTCAGCAGCACCTGCCACATACGCTATCCTATTCCATCTCGGCATTGCTGCAGTTCTATTGCTCTATGTACTTTTCTGGTTGAAGCTGGACTTGTTTACTACACTCAAAACTGTAGGACTTTTGGGTGTTTTTCTTATGTTCGTGGGACACAGAATTCTCTCCCATCTCGCTTCAACTTCATCCAAGTTGAAGTCTGCATGA 2181 0.4287 MPRHDQRGLLVKLHSKKVNTPQLKSSLRSAFLPSHLPAAAAFNGAGMARYLGGLLALLFCASICGSVTIPGPISDAHRSVASELFSGSFSSLEEAYEALRVFEILGIGNKPDVSATTCKQVVENLGSSSPVKDLFYALKVNGILKCKVNADVFKDIAVRVKATVNDASTLVDMYHSIASLVLIKDQASDVDVLLADADGIFHSIKALSQSDGRWRYSSDNPESSTFAAGLALEALAGVISLASSEIDLSRVNTVKNDILKLFDSIEKYDDGTFYFDEKFVGGREHQGSLSTTSSVVRGVTTFASVISGKVNLPGHKVLGLAKFFLGIGIPVTLCTLDFFLWCRVSIPLVLSLPETVYSLSQKDQLKVRVNTVLGSAAPPLTVKIVRAFRSDAKDSAIFESKELQYDESNGIHVLEVFPDNVDVGTYVFVFEIVLRDSAGENVFATGGQIHVPIYVTGIIKVSNAEIAVLDSDLGSVETQKKLDLDGNVVELSANHLQKLRFSFQLTTPHGHAFKPHQALLKLKHETKHEHVFVVGNTGKKFEIVLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHVDLELPETPEKAVRLPPLPVDPYSRYGPKAEIAHIFRAPEKRPPQNLSLTFLSLTLLPFIGFLVGLLRLGVNFKNFPSSAAPATYAILFHLGIAAVLLLYVLFWLKLDLFTTLKTVGLLGVFLMFVGHRILSHLASTSSKLKSA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02702 726 PANTHER RIBOPHORIN II 54 725 IPR008814 GO:0006487|GO:0008250|GO:0016020
Vimu6g02702 726 Pfam Oligosaccharyltransferase subunit Ribophorin II 54 718 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02702 Vimu-Chr6 23556196 23564767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02702 K12667 - gmx:100780415 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02702 6 23556196 23564767 Vimu6g02702 6 23556196 23564767 ECH
Vimu6g02702 6 23556196 23564767 Vimu3g01338 3 24373519 24381464 PCT