Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02646 ATGGCTGCAGATTCAAACTCAAACCTCAGAATCACCATTGAAAGAAATCCTCCACAGTCACGCCTAGCTGAGTTGAACATCAAGTGCTGGCCCAAGTGGGGTTGTTCTCCAGGGAAGTACCAGTTGAAATTTGATGCAGAAGAGACATGCTACTTGGTGAAAGGGAAGGTGAAGGCTTACCTAAAAGGGTCATCAGAGTTTGTGGAGTTTGGAGCTGGAGACCTTGTCACCATTCCAAAGGGACTCAGTTGCACTTGGGATGTGTCTCTTGCAGTGGATAAGTACTACAAATTTGAATCAAATTCTTCTGCTACATCATCATCTTGTTAA 330 0.4424 MAADSNSNLRITIERNPPQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYLKGSSEFVEFGAGDLVTIPKGLSCTWDVSLAVDKYYKFESNSSATSSSC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02646 109 Gene3D Jelly Rolls 2 98 IPR014710 -
Vimu6g02646 109 PANTHER OS04G0445200 PROTEIN 6 99 - -
Vimu6g02646 109 SUPERFAMILY RmlC-like cupins 17 89 IPR011051 -
Vimu6g02646 109 CDD cupin_TM1112-like 30 98 - -
Vimu6g02646 109 Pfam EutQ-like cupin domain 23 96 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02646 Vimu-Chr6 23142472 23143053 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02646 - - pvu:PHAVU_001G167300g 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02646 6 23142472 23143053 Vimu6g02646 6 23142472 23143053 ECH
Vimu6g02646 6 23142472 23143053 Vimu3g01422 3 26975399 26975863 PCT