Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01422 ATGGCTTCCGATTCCAATTCAAATCTTAGAATCACCATTGAAAGCAATCCTCCCGAGTCACGTCTAGCTGAATTGAATATCAAGTGTTGGCCCAAATGGGGTTGCTCTCCAGGGAAGTACCAATTAAAGTTTGATGCTGAAGAGACGTGCTATCTGTTGAAAGGGAAGGTTAAGGCATACCCAAAAGGGTCATCAGAGTTTGTGGAGTTTGGTGTTGGAGACCTTGTGACCATCCCAAAGGGACTCCATTGCACTTGGGATGTTTCAGTTGCTGTGGATAAGCACTATAAATTTGAATCAACACCATCATCTTCTTCTTAG 321 0.433 MASDSNSNLRITIESNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGVGDLVTIPKGLHCTWDVSVAVDKHYKFESTPSSSS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01422 106 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Vimu3g01422 106 Gene3D Jelly Rolls 2 98 IPR014710 -
Vimu3g01422 106 PANTHER OS04G0445200 PROTEIN 5 99 - -
Vimu3g01422 106 CDD cupin_TM1112-like 30 98 - -
Vimu3g01422 106 SUPERFAMILY RmlC-like cupins 25 96 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01422 Vimu-Chr3 26975399 26975863 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01422 - - gmx:100500522 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01422 3 26975399 26975863 Vimu3g01422 3 26975399 26975863 ECH
Vimu6g02646 6 23142472 23143053 Vimu3g01422 3 26975399 26975863 PCT