Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02638 ATGGAGAACTTTTTTCGCCTAGTGGACCACGAAGACTTCTTCTCTCGTCGTTGCATTTGGGTGAACGGCCCTATAATCGTAGGGGCAGGTCCCTCAGGGCTTGCCACAGCAGCATGCCTTAGAGAACAAGGGGTGCCCTTCATGGTTCTCGAACGTGCAGACTGCATAGCTTCTCTGTGGCAGAAACGAACCTATGACAGACTCAAGCTTCACCTCCCTAAGCAATTCTGCCAGCTCCCCAAGCTCCCTTTCCCTCAAGACTTCCCCGAATACCCCACAAAGAAACAGTTCATAGAGTACCTAGAGTCTTACGCCACCCACTTCCAGATCAACCCTCAGTTCAACGAGTGTGTTCAGTCCGCAAGGTACGACGAGACAAGCGGATTGTGGCGGGTGAAGAGCGTTTCCTCCACTGGCGCCACACGCAACGAGGTGGAGTACATTTGCAGGTGGCTCGTGGTGGCCACTGGGGAGAATGCCGAGTGTGTGATGCCGGATATTGAAGGCTTGAGTGACTTCAAAGGTGAGGTCATCCATGCTTGTGATTACAAGTCAGGGGAAAGCTTCAGGGGAAAAAAGGTCCTTGTTGTTGGCTGTGGCAATTCCGGCATGGAGCTCTCTCTTGATCTTTGCAACCACCATGCTTCTCCTTCCATGGTTGTTCGCAGCTCGGTTCACGTGTTGCCCAGAGAAGTATTTGGGATATCAACGTTTGAATTTGCGGTTATGATGCTGCAATGGCTGCCCCTTTGGCTTGTTGACAAGATTATGTTGATGTTGGCATGGTTTGTTTTTGGGAACGTGGAGAAGTTGGGGCTGAAAAGGCCTTCGACAGGTCCTTTGGAGCTGAAGAACACAAAGGGAAAGACCCCGGTTTTGGATCTTGGTGCCTTGGCGAAGATTAGATCCGGTGATATAAAAGTGGTGCCAGGAGTCAAGAGGTTCAATAATGGAGAAGCTGAGCTTGTCAATGGTGAAAAGCTCGATGTCGATGCAGTGGTGCTGGCAACCGGTTACCGCAGTAACGTGCCTTATTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATTCCCGAAGATGCCATTCCCTCACGGTTGGAAGGGAAATGCTGGACTTTATGCTGTGGGGTTCACGAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTGTGAAAATCGCTCAAGATATTGGCAAAGTTTGGAAAGACGAGACTAAGCAAAAGAAACAGCGCACTACTGCATGTCATAGAAGATGCATTTCTCAGTTCTAA 1272 0.4976 MENFFRLVDHEDFFSRRCIWVNGPIIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPQDFPEYPTKKQFIEYLESYATHFQINPQFNECVQSARYDETSGLWRVKSVSSTGATRNEVEYICRWLVVATGENAECVMPDIEGLSDFKGEVIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREVFGISTFEFAVMMLQWLPLWLVDKIMLMLAWFVFGNVEKLGLKRPSTGPLELKNTKGKTPVLDLGALAKIRSGDIKVVPGVKRFNNGEAELVNGEKLDVDAVVLATGYRSNVPYWLQEGEFFSKNGFPKMPFPHGWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGKVWKDETKQKKQRTTACHRRCISQF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02638 423 Gene3D - 24 407 IPR036188 -
Vimu6g02638 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 417 - -
Vimu6g02638 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Vimu6g02638 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Vimu6g02638 423 Pfam Flavin-binding monooxygenase-like 26 346 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vimu6g02638 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Vimu6g02638 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Vimu6g02638 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 280 IPR036188 -
Vimu6g02638 423 FunFam Flavin-containing monooxygenase 24 406 - -
Vimu6g02638 423 SUPERFAMILY FAD/NAD(P)-binding domain 191 399 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02638 Vimu-Chr6 23038389 23040220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02638 K11816 - gmx:100819987 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02638 6 23038389 23040220 Vimu6g02638 6 23038389 23040220 ECH
Vimu6g02638 6 23038389 23040220 Vimu3g00647 3 6975286 6977355 PCT