Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02611 ATGCCAAGCCGCCGGAGATTGCGCCTGGCTGCAAACGTGGTTCCGTCAAAGGAGACTCCAAACAATGATCCCATTTCTCATCATTCCTCACATCCTCCTCTTAATGAAAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCTCACCCGTGGCATGACCTTGAGATAGCAAATATCCTTCGACCAGCTATAAACAGGACCAATTTGGCTTTAAAGGAATATGTATCCTTGGAAGTGATTGAGATAGGGAAAGGAAGCAAGGTGAAATACGAGCTGGATAAAAAATCGGGACTTATCAAGATCGATCGCGTGCTTTACTCATCGGTTGTGTATCCTCACAACTATGGTTTTATCCCACGTACTATTTGTGAGGACAATGATCCCCTGGATGTCTTGATCATCATGCAGGAGCCAGTTCTTCCCGGCTGCTTTCTTCGGGCCAAAGCAATCGGTCTCATGCCCATGATTGATCAGGGGGAGAAAGATGATAAAATAATCGCTGTCTGTGCTGATGATCCTGAGTATCGTCATTACAATGATATCAAGGAGCTGCCTCCACATCGTTTAGCTGAAATTCGTCGCTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAAGTTGCTGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTTGAAGCTATTAAGAGATCCATTGGAAGGCTTGAGGCGGTAGCCGTTGATGAACGATTCACGTCAAGGATTTTGAATGGCGGAACAATTGATGATATTTGCTTGGAAAAAGGCCGCATTATGAATATTATGTTGGAATAA 798 0.4386 MPSRRRLRLAANVVPSKETPNNDPISHHSSHPPLNERIISSMTRRSVAAHPWHDLEIANILRPAINRTNLALKEYVSLEVIEIGKGSKVKYELDKKSGLIKIDRVLYSSVVYPHNYGFIPRTICEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAIKRSIGRLEAVAVDERFTSRILNGGTIDDICLEKGRIMNIMLE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02611 265 MobiDBLite consensus disorder prediction 12 34 - -
Vimu6g02611 265 MobiDBLite consensus disorder prediction 15 34 - -
Vimu6g02611 265 Hamap Inorganic pyrophosphatase [ppa]. 74 231 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu6g02611 265 Pfam Inorganic pyrophosphatase 80 229 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu6g02611 265 SUPERFAMILY Inorganic pyrophosphatase 43 234 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu6g02611 265 PANTHER INORGANIC PYROPHOSPHATASE 26 228 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu6g02611 265 FunFam Soluble inorganic pyrophosphatase 4 46 236 - -
Vimu6g02611 265 ProSitePatterns Inorganic pyrophosphatase signature. 126 132 - -
Vimu6g02611 265 Gene3D Inorganic pyrophosphatase 46 235 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu6g02611 265 CDD pyrophosphatase 80 227 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02611 Vimu-Chr6 22738259 22741800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02611 K01507 - gmx:100784203 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02611 6 22738259 22741800 Vimu3g01376 3 25792261 25795316 PCT