Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02598 ATGAAAGGCATAGATATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTCTTAGCATGGATGAACCCTCTTCCTCCATATCCAACACTGCTCAACTTGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACAGATCCAAGAAGAACACCCTCCAGAGACTTCATTGTCCCTAGTTCTTCTCCTAAACCTTTGCATGATCATCTCCCCAAGCCTAAGAAAAACTCCACTTCCAAGCCAAGTGGCCAGAAAAAGAAAAATCCAGCAAAGGGTCTTGATCAAAAGAAGAAAAGTAGTGTGGAAAAGTTGACCGAACACATCACAAACAATTACTCTTCAAAACCAATTGATAGTATTCTGAGGAGGAGTTGGGTTAGGCCACCTACTGATTTGATCACCCCTCCTGGTTCTTCGAGATATTTGCTCGGTGACATGCCTTCCTTCCATGGTGGATCATCACTTTATGATCCTGTTTTGGCTTTAAGTAACGTTGACAAGGACAAAGCTCAGGTAGTAGTTTTGAGGGTTTCTCTGCACTGCAGAGGTTGTGAAGGGAAGGTGAGGAAACATCTCTCCAGAATGCGAGGAGTAACATCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTGGTTGGTGATGTGACTCCTTTGAGCGTATTGGCAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCAGAACCTGCTTCAGTAGTTGGATCCGGTTATGCAGAAACGAAGAAAACAAATTTTATCTAA 765 0.4405 MKGIDIFCASQASTAICLSMDEPSSSISNTAQLGGRAIDRHNPIITDPRRTPSRDFIVPSSSPKPLHDHLPKPKKNSTSKPSGQKKKNPAKGLDQKKKSSVEKLTEHITNNYSSKPIDSILRRSWVRPPTDLITPPGSSRYLLGDMPSFHGGSSLYDPVLALSNVDKDKAQVVVLRVSLHCRGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEPASVVGSGYAETKKTNFI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02598 254 ProSiteProfiles Heavy-metal-associated domain profile. 170 236 IPR006121 GO:0046872
Vimu6g02598 254 MobiDBLite consensus disorder prediction 87 101 - -
Vimu6g02598 254 MobiDBLite consensus disorder prediction 22 101 - -
Vimu6g02598 254 Gene3D - 167 232 - -
Vimu6g02598 254 SUPERFAMILY HMA, heavy metal-associated domain 171 228 IPR036163 GO:0046872
Vimu6g02598 254 CDD HMA 174 227 IPR006121 GO:0046872
Vimu6g02598 254 Pfam Heavy-metal-associated domain 175 227 IPR006121 GO:0046872
Vimu6g02598 254 PANTHER OS08G0405700 PROTEIN 6 239 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02598 Vimu-Chr6 22575254 22577012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02598 - - gmx:100810015 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02598 6 22575254 22577012 Vimu3g01405 3 26643186 26644372 PCT