Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02592 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCGACCCCTTTTCATCCATTTGGTGGGGCGGTTGATGTCATTGTTGTTCAGCAGCAAGATGGCACGTTCCGCTGCACGCCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTGCTCAAAGGTGCTGAAAAGGTTGTTCGGATAAACGTCAATGGGGTTGAATCACACTTCCACATGTATCTTGACAATTCGGGGGAGGCTTATTTTGTAAAAGAGGTGGATGATGATGGTGGTGATAATGGAATAAAGTCAAATGCGACTGCTGGTAACTCTGAGTGTAGTCAAGAAGACTGTGGTGTCGAAATTGATGATAAAAATAATAGTTATCTGAGCATTGATGGTAGAGTTCGTCACAGATTTGACCATAGCATATCTGATTCAGGGGTGCGGTATCTTACAGGTGAAGGCCATTCCTCGGTTTTGTCACAACTTCAAAGGGCAGAATCTGATGTCGATAGGAGATTTTATGAGTTCCCAGATGATCAATCCTCTTTTGAAGGTTCACTTGATGTTTCGGAATATGATTCTACTAGATATGAGAATCTAGACGTGGATAATTTTATGGACTCACAGGGCTCCCATCCGGAGGTGGTTTTGGTTAGTGTTGATGGTCATGTATTGACGGCCCTTATCTCAGAATCGGAGCAGAATGAGGACAATGTTCAGTTAAAAAATCCTCAATTTCATCTAGGCCCAGGTGAAGGGACTGACTTCTATGAGGGCAATGGGGAACTTATTTCTGATGAAAATGCTTGGACTGCTGATTATGTTAGTCCGCTGGATGCTTCTAGTAGTTATGACACTAAGGTAGGTGATGATACTTCCGGGCTCTTGTTGGAAGCTAAAGGACAGGGGGAAATTAATTGTCACACTGAGGAAACCTTAGTGATTAAAAATCAAGAAAATAATCTTTTGCAAACTGATTCAGAAGAGGCTGTATCTTGTATGAAGAGAGAGAGTGTCTTCAAAAGTTGTTTGGAATTACGTGAATTTACTCAGCAGGCTGGAAACGATGATTTACAAGATGTAGATTCTTCATTGGGGGTTCAGAATTCAGCAGAGGAATCCAATGCAAATATTTCAATCACTGATGAGAATAAAGACGAAAACATTCAGGTTGATATACAAGATGTAGATTCTTCACTGGAGGTTCGAAATATAGCAGAGAATTTCATTGCAAATGGTTCAATTACTGATGAAAATAAACAAGAAAACATCGATCAATGTAGAAAAAGTGACAGGTTATCTCCCCTTAGTGTGCCTTCTTCCTTTGATGACCATAGTTCTCCAGAATTAGAAGTAGAAGCTCAAGTGGTTGATAGAGATGCATCAGTGAAAGTGGACAATGGTTCTGGCAGTCATTCCGGTACTAAAGATGTTATTGAATGTAACGATGAACGTGTTGGAGAGTCAGTATCAAATGATCATGTAGATGATAGTGAACAAACTCCTGCACTTGAAGATGGCAATAAGAAAAGTGAACTTACTGAACCTCAAATTGTAACTTCCATTGACGAGGACCAATGTCATTCTGCTTTGAGATTTGAGGCATCACTTTGTGGTCACGAACTTAAGGCGGGTATGGGGTTGGTTGCTGCTGCTGAGGTTTTTGAAGCACATCGGATATCTGTGGAGGAATTTAGAAGTTCAGCATCATCCATAATTAAGAATGAAAATCTGGTTTTGAAGTTCAGAGAGAGGTATCTGCGGTGGGAAAAGGCTGCCCCTCTTGTCCTTGGAAAGACTGTATTTGGTTTAGACTTACCTGTTGATCCCAAAGATACAATTCCAGTGAGACAGGACGATACAGTAAAGGCTACAAATGAAGTTTCCGGACCAGCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTAGAAGAGTCAAGACAATTGAGCACACTGATAGTGAATCAAATGAGGATGTATTTGTAGATTCCGAATCTGATTGGCAAACTTCTACTGTTGAACCTTCTCCAACATCTGCTAGGCATGAGTCTCCTCGCAAGCAATTCGTGAGGACAAATGTTCCATCGAATGAGATGATAGCATCCTTAAATCTCAAGGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAAAACAGCAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTGGGGCAGGTCATGCCTTTGGTTGGGAGAGATTGGACACAGTCTGGAGTGGCAAGGCTTTTCTCAGCTATTAAAGAAAATGGATACCAGTTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTTACCAGGAATTTTTTGGTTAACCTGAAACAGGATGGCAAGAACTTACCCAATGGACCTGTTGTCATTTCTCCTGACGGATTATTTCCCTCTCTTTACCGAGAAGACTTGTTACTGTTGTCAAATCACCAAAGTGAGCTAGACAATAAAAGGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAACCCATTTTATGCTGGGTTTGGCAATAGAGACACTGATGAACTTAGTTACAGAAAGATTGGAATCCCGAAGGGCAAGATATTTATTATCAATCCCAAGGGTGAAGTCGCAACAAGTCACCGTATTGATTCAAAATCCTACACATCATTACACACACTCGTCAATGACATGTTCCCTCCCACTTCTCTGGTTGAGCAGGTGATAAAAGAGTCTCCAAAACGTGTAGCTTTTCAGTTGCTAACGCTACTCAAGTTGGATGGAGAATCTAGGGAGAATAGGAAGTTAGTGAAGGACAAAGCAATTGCTTTCGAGCTTTGTTTTGTTGCTCATTCTTTATTTTTCGAAACCAACGCTCTTGGGTAA 2973 0.4107 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRCTPWYVRFGKFQGVLKGAEKVVRINVNGVESHFHMYLDNSGEAYFVKEVDDDGGDNGIKSNATAGNSECSQEDCGVEIDDKNNSYLSIDGRVRHRFDHSISDSGVRYLTGEGHSSVLSQLQRAESDVDRRFYEFPDDQSSFEGSLDVSEYDSTRYENLDVDNFMDSQGSHPEVVLVSVDGHVLTALISESEQNEDNVQLKNPQFHLGPGEGTDFYEGNGELISDENAWTADYVSPLDASSSYDTKVGDDTSGLLLEAKGQGEINCHTEETLVIKNQENNLLQTDSEEAVSCMKRESVFKSCLELREFTQQAGNDDLQDVDSSLGVQNSAEESNANISITDENKDENIQVDIQDVDSSLEVRNIAENFIANGSITDENKQENIDQCRKSDRLSPLSVPSSFDDHSSPELEVEAQVVDRDASVKVDNGSGSHSGTKDVIECNDERVGESVSNDHVDDSEQTPALEDGNKKSELTEPQIVTSIDEDQCHSALRFEASLCGHELKAGMGLVAAAEVFEAHRISVEEFRSSASSIIKNENLVLKFRERYLRWEKAAPLVLGKTVFGLDLPVDPKDTIPVRQDDTVKATNEVSGPASSGRRWRLWPIPFRRVKTIEHTDSESNEDVFVDSESDWQTSTVEPSPTSARHESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGKQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGRDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLVNLKQDGKNLPNGPVVISPDGLFPSLYREDLLLLSNHQSELDNKRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSLVEQVIKESPKRVAFQLLTLLKLDGESRENRKLVKDKAIAFELCFVAHSLFFETNALG 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02592 990 PANTHER LIPIN 1 940 IPR026058 -
Vimu6g02592 990 MobiDBLite consensus disorder prediction 658 688 - -
Vimu6g02592 990 MobiDBLite consensus disorder prediction 420 512 - -
Vimu6g02592 990 MobiDBLite consensus disorder prediction 477 512 - -
Vimu6g02592 990 MobiDBLite consensus disorder prediction 665 681 - -
Vimu6g02592 990 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Vimu6g02592 990 SMART lns2 741 909 IPR031315 -
Vimu6g02592 990 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 534 641 IPR031703 -
Vimu6g02592 990 Pfam LNS2 (Lipin/Ned1/Smp2) 696 929 IPR013209 -
Vimu6g02592 990 MobiDBLite consensus disorder prediction 446 460 - -
Vimu6g02592 990 SUPERFAMILY HAD-like 733 895 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02592 Vimu-Chr6 22505210 22513366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02592 K15728 - gmx:100780784 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02592 6 22505210 22513366 Vimu3g01390 3 26246184 26260359 PCT