Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02573 ATGGCGGCCATAACCCGCCTCGTAAAGCGCACCCCCTACCTCCCTTGCGCGGCGCGATTCCTGTCTAACGCGCCGCCGCAGAAGGAGAGGAATGTCCAGTGGGTGTTCCTGGGGTGTCCCGGCGTTGGAAAAGGCACCTACGCCAGCCGGCTTTGCAACCTCCTTGGCGTCCCTCATATCGCCACCGGTGATCTCGTCCGTAGCGAGCTTGCCTCCAACGGCCCCCTTTCTTCCCAGCTATCAGAAATTGTTAATCAAGGTAAATTGGTGTCCGATGAAATCATCATGAGTTTATTGTCGAAGAGGCTGGCTGATGGGGAAGCAAAAGGTGAATCGGGATTTATTCTTGATGGGTTTCCACGAACAATAAAGCAAGCAGAAATATTGGAAGGAGTAACTGACATTGACTTGGTAGTCAATCTGAAGATCCAAGAAGAAGCACTGCTTGCAAAATGCCTTGGTAGAAGAATTTGCAATCAATGTGGAGGAAATTTTAATGTTGCTTCCATCAGCATCAAGGGTGAGAATGGGCGCCCAGGAATGGTCATGGCTCCACTTCTTCCTCCTGCACATTGTATGTCAAAGCTCGTTACACGTTCAGATGATACTGAAGAAGTGGTCAAAGAAAGGCTTCGAATATACAGTGAAAAGAGTCAGCCTGTGGAGGAATTTTACCGTAGCAGAGGAAAACTGTTGGAGTTTGATTTGCCAGGAGGGATCCCAGAATCTTGGCCTAAGTTGCTACAAGCTCTTAATCTTTACGATTATGAGGAGAAGCAATCCGTTGCTGCATAA 795 0.4855 MAAITRLVKRTPYLPCAARFLSNAPPQKERNVQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRSELASNGPLSSQLSEIVNQGKLVSDEIIMSLLSKRLADGEAKGESGFILDGFPRTIKQAEILEGVTDIDLVVNLKIQEEALLAKCLGRRICNQCGGNFNVASISIKGENGRPGMVMAPLLPPAHCMSKLVTRSDDTEEVVKERLRIYSEKSQPVEEFYRSRGKLLEFDLPGGIPESWPKLLQALNLYDYEEKQSVAA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02573 264 Hamap Adenylate kinase [adk]. 32 252 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 PANTHER NUCLEOTIDE KINASE 22 248 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 Gene3D - 19 257 IPR027417 -
Vimu6g02573 264 CDD ADK 33 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 252 IPR027417 -
Vimu6g02573 264 Pfam Adenylate kinase 37 229 - -
Vimu6g02573 264 ProSitePatterns Adenylate kinase signature. 114 125 IPR033690 -
Vimu6g02573 264 PRINTS Adenylate kinase signature 199 214 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 PRINTS Adenylate kinase signature 216 230 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 PRINTS Adenylate kinase signature 35 48 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 PRINTS Adenylate kinase signature 63 77 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 PRINTS Adenylate kinase signature 114 130 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu6g02573 264 NCBIfam adenylate kinase 33 252 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02573 Vimu-Chr6 22359946 22361919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02573 K00939 - gmx:102666238 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02573 6 22359946 22361919 Vimu6g02573 6 22359946 22361919 ECH
Vimu6g02573 6 22359946 22361919 Vimu3g01164 3 19520012 19522869 PCT