Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01164 ATGATAATAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAATGTGGGGGTAATTTTAATGTTGCTTCAATTGACATTAAGGCTGACAATGGGAGCCCCGGAATGGTTATGGCTCCACTTCTTCCTCCTGCGAATTGCATTTCTAAGCTCATTACTCGATCAGATGATACTGAAGCAGTAGTCAAAGAAAGGCTTCGAATATACCGTGAAATGGTATTGTGCACACTATATTATTATTATGTGTGGACTTCAAATAGAATGACTGCTTGA 339 0.3923 MIIEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASIDIKADNGSPGMVMAPLLPPANCISKLITRSDDTEAVVKERLRIYREMVLCTLYYYYVWTSNRMTA 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01164 112 Gene3D - 3 109 IPR027417 -
Vimu3g01164 112 PANTHER NUCLEOTIDE KINASE 4 102 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01164 Vimu-Chr3 19520012 19522869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01164 K00939 - gmx:100777619 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01164 3 19520012 19522869 Vimu3g01164 3 19520012 19522869 ECH
Vimu6g02573 6 22359946 22361919 Vimu3g01164 3 19520012 19522869 PCT