Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02475 ATGGATGAAGGAACTGAGAGGATGGAAGAAGGCCTGAATTCACCATTGAATGGAGATGGTAATAAGAATGATTTGAAGAAGCAGGTAACCATTAAAAGCGTTGAGCATGACGACAGAGACACAGCGGAGCCACCACTGGTTAAGAAGAAGACCAAGAGAGTTGCCACCCTCGATGCATTTAGGGGTCTCACCATCGTGTTAATGATCCTGGTAGACGATGCTGGTGAAGCTTATCCACGCATTGATCACTCCCCATGGAATGGATGTACTTTGGCCGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCCCTTGCACTCAAGAGAATCCCCAAGAAAAGGGATGCTGTAAAGAAGATAATTCTTAGGACAATTAAACTTCTCTTCTGGGGTATAATTTTGCAAGGGGGTTACTCTCATGCTCCTAATGATCTTGAATATGGAGTTAACATGAAATTTATCCGATGGTGTGGCATTCTCCAGAGAATAGCTCTTGTATACTGTGTTGTAGCTCTAATAGAGACATTTACCACCAAGCTTAGACCCACAACGTTGGGTTCTGGAAACCTATCCATTTTTACTGCTTATAAATGGCAATGGCTTGGAGGTTTTGTAGCATTTCTCATTTACATTATCACAACCTTCACTCTCTACGTTCCTGATTGGAGTTTCGTGGATCGTTTTAACGGCGATGAACCGAAGAGATACACGGTCATTTGTGGGATGAGAGGACACCTAGGGCCAGCATGTAACGCTGTCGGATACGTGGACCGACAGGCGTGTACCCTCAATTATCCTGGAGATGGTCCTTTCCGTGAGGATGCTCCAAGTTGGTGTCGTGCTCCTTTTGAACCTGAAGGCTTGTTGAGCAATCATCTCTGGCACTATTGGGATCCACTATGGGCACGTCTTGATTCACTTCAAGGGTCATTTGGAGAGGCTAAAACACTGGATCTTAATGGGGCTTGTGTTACTCATCATAGCCATAATCCTTCACTTCACAGATGTTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATTGTTTTCTCTGGGTTCTACATATTGATCGATGTTTTGGGGCTCCGAACTCCATTTTTGTTCTTGGAATGGATAGGAATGAATGCTATGCTAGTATTCGTGATGGCAGCTCAGGGAATATTTGCAGCTTTTGTAAATGGATGGTACACTGGATCAAGAAGCATGTCTTTGACAATGTCTGGCACTCCGAGAGAGTGGGAACCATAA 1263 0.4426 MDEGTERMEEGLNSPLNGDGNKNDLKKQVTIKSVEHDDRDTAEPPLVKKKTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKKRDAVKKIILRTIKLLFWGIILQGGYSHAPNDLEYGVNMKFIRWCGILQRIALVYCVVALIETFTTKLRPTTLGSGNLSIFTAYKWQWLGGFVAFLIYIITTFTLYVPDWSFVDRFNGDEPKRYTVICGMRGHLGPACNAVGYVDRQACTLNYPGDGPFREDAPSWCRAPFEPEGLLSNHLWHYWDPLWARLDSLQGSFGEAKTLDLNGACVTHHSHNPSLHRCFSYVCFTAGAAGIVFSGFYILIDVLGLRTPFLFLEWIGMNAMLVFVMAAQGIFAAFVNGWYTGSRSMSLTMSGTPREWEP 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02475 420 MobiDBLite consensus disorder prediction 1 47 - -
Vimu6g02475 420 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 53 183 IPR012429 -
Vimu6g02475 420 PANTHER LD22376P 340 409 - -
Vimu6g02475 420 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02475 Vimu-Chr6 21518906 21524359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02475 K10532 - gmx:100819967 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02475 6 21518906 21524359 Vimu6g02475 6 21518906 21524359 ECH
Vimu3g01821 3 32914530 32923331 Vimu6g02475 6 21518906 21524359 PCT