Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02424 ATGGAAAACTCAACATCAAAGCATGAGGTCCTGAAGCCAGTGATCCTCAAAGCAGGTGTTCCTTTGGCTGTGTCTTTTGCTGGTTTTGTCTATGCTTGGTTCGTGGCAAAGAAAAGCCTCTCTAAAACCTCTTCTTTATCACCAAATGGAGCAAGTTCCCATGAAAACGATTTCCATCACGACCCTTCATATGAAGAAAGTTGTCATAGTCATAGTCATAGCCACAGCCTCTCTTGTATGGAAGATGAAGGAAATAGTACAACTTTGGATGAAAGTGTTGTTGCTGAAAGTTCTCTGATCCCTGACATCCCATATTTAGAAGAGGAGATTAATGGCTTAAGATGCAGGATTGAGGGTATGCAAATGAAAGAGTTGGCCTTGCGTTTGCAGTTTGATCGTTATTGTGGGTTGAAAGAGCAAGAAATGGTGGTTGGGGAGATCAAAAACATGTTGTCACTTGAGACTGCTCGAGTTGACTTCTTGGATAGGGAGATTTCATCGATGGAGACACAGAATAGGAGGTTGGAGAGTTTTGTTGCTCAATATCTCAGAGTTGTAGAACAGATAGAGCGTTTGAAATCTGAGAATAGAATGCTTCGGAGGAAGTTTCAGAAGCTAACGAGGAAATCAAAGGCACAAACCCGCGTGGCCAAGGAGCAGGCTTTGAAAATAAAAATGGAAGAAGAAGAAATCTTGAGAAGCCGTGATGCCTTGAAAACAAAAGTTGATGTCATAGGTAAATTAGAGGACAATATGGAAGAGCTGCAGAGGGATTTGGATCAATTGCAGAATGAAAAGAATGAACTTCTGAAGAAGCTTGACACAGCAGAAAAATCACATGCTTCAAAGATTGAAGGTGGAGATATAAGTAGGGAAGAGTACAAACAGGTTGTGGATGAACTAGAGCAGATGAAGAAAGAACGAGCAGATGAAGCTAAAGAACTCATTTACTTGCGGTGGACCAATGCCTGTTTAAGGCATGATCTAATGAGGCCTCATGAACAACAGCAAGATCAAGATAAAATCCATTCAGGATTGGAATTTGGAAGAAATGATGTGGTTATCCATTATGACTCAGAGCACGAACTACACAGCGATCCTTCCTTTGATGAGCATCGTAGTGGTCATGATCACAGTGACAGTGGTTCTTCAAAAAGGACAAAGTTGCTTGAAAGACTCAAGAGATGGGTGGAAGGCAGTGAAAAGGCTAGAGTTAGGCATTCTGTTTCCAAAGGGACAGATGAAAATCTAGTTCCCAGAAGGAAATCATGTTCTAGTGCTTGA 1284 0.4143 MENSTSKHEVLKPVILKAGVPLAVSFAGFVYAWFVAKKSLSKTSSLSPNGASSHENDFHHDPSYEESCHSHSHSHSLSCMEDEGNSTTLDESVVAESSLIPDIPYLEEEINGLRCRIEGMQMKELALRLQFDRYCGLKEQEMVVGEIKNMLSLETARVDFLDREISSMETQNRRLESFVAQYLRVVEQIERLKSENRMLRRKFQKLTRKSKAQTRVAKEQALKIKMEEEEILRSRDALKTKVDVIGKLEDNMEELQRDLDQLQNEKNELLKKLDTAEKSHASKIEGGDISREEYKQVVDELEQMKKERADEAKELIYLRWTNACLRHDLMRPHEQQQDQDKIHSGLEFGRNDVVIHYDSEHELHSDPSFDEHRSGHDHSDSGSSKRTKLLERLKRWVEGSEKARVRHSVSKGTDENLVPRRKSCSSA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02424 427 Coils Coil 238 279 - -
Vimu6g02424 427 Coils Coil 291 314 - -
Vimu6g02424 427 MobiDBLite consensus disorder prediction 363 388 - -
Vimu6g02424 427 MobiDBLite consensus disorder prediction 401 427 - -
Vimu6g02424 427 MobiDBLite consensus disorder prediction 54 78 - -
Vimu6g02424 427 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 12 403 IPR040265 -
Vimu6g02424 427 Coils Coil 182 209 - -
Vimu6g02424 427 MobiDBLite consensus disorder prediction 45 84 - -
Vimu6g02424 427 MobiDBLite consensus disorder prediction 401 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02424 Vimu-Chr6 21170287 21171830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02424 - - gmx:100805210 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02424 6 21170287 21171830 Vimu6g02424 6 21170287 21171830 ECH
Vimu6g02424 6 21170287 21171830 Vimu3g00905 3 10989637 10991330 PCT